Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03273 and BL05229
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:56
# Commandline: needle
# -asequence dna-align/BSNT_03273___ypeQ.1.5803.seq
# -bsequence dna-align/BL05229___ypeQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03273___ypeQ-BL05229___ypeQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03273___ypeQ-BL05229___ypeQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03273___ypeQ
# 2: BL05229___ypeQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 136/193 (70.5%)
# Similarity: 136/193 (70.5%)
# Gaps: 17/193 ( 8.8%)
# Score: 437.5
#
#
#=======================================
BSNT_03273___ 1 TTGGATAAGAAAATGATCTTTAAAGAACTGACAGAATTGCACGATGAATA 50
||||||||||||..|||||||||.|||||||||.|.|||||.||....||
BL05229___ype 1 TTGGATAAGAAAGAGATCTTTAAGGAACTGACACATTTGCAGGACACCTA 50
BSNT_03273___ 51 TTG-CAAGGACTGTTTTATTAAGAAGCAGTTTCGCAAAGAATTTGGCAAA 99
.|| .|||| .||.||.||.||.||.||.||..|.|||||||..||.|||
BL05229___ype 51 CTGTGAAGG-GTGCTTCATCAAAAAACACTTCAGAAAAGAATACGGAAAA 99
BSNT_03273___ 100 ACTTATGCGCATTCATTTTG--TATCAATAAATGTACGGTTGGTGAAAAG 147
||.|||||.||..||||||| |.||| |||||||||||.||.||||||
BL05229___ype 100 ACGTATGCCCACGCATTTTGCATTTCA--AAATGTACGGTCGGAGAAAAG 147
BSNT_03273___ 148 CT--GAAACAATACGGAGATGT-CTTAACCAATCACTAA---- 183
|| |.|.| ||.|||||.|| ||.| |||.||..||
BL05229___ype 148 CTCCGCACC--TATGGAGACGTGCTGA--CAAACAAAAATTGA 186
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