Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03273 and BL05229

See Amino acid alignment / Visit BSNT_03273 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_03273___ypeQ.1.5803.seq
#    -bsequence dna-align/BL05229___ypeQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03273___ypeQ-BL05229___ypeQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03273___ypeQ-BL05229___ypeQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03273___ypeQ
# 2: BL05229___ypeQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity:     136/193 (70.5%)
# Similarity:   136/193 (70.5%)
# Gaps:          17/193 ( 8.8%)
# Score: 437.5
# 
#
#=======================================

BSNT_03273___      1 TTGGATAAGAAAATGATCTTTAAAGAACTGACAGAATTGCACGATGAATA     50
                     ||||||||||||..|||||||||.|||||||||.|.|||||.||....||
BL05229___ype      1 TTGGATAAGAAAGAGATCTTTAAGGAACTGACACATTTGCAGGACACCTA     50

BSNT_03273___     51 TTG-CAAGGACTGTTTTATTAAGAAGCAGTTTCGCAAAGAATTTGGCAAA     99
                     .|| .|||| .||.||.||.||.||.||.||..|.|||||||..||.|||
BL05229___ype     51 CTGTGAAGG-GTGCTTCATCAAAAAACACTTCAGAAAAGAATACGGAAAA     99

BSNT_03273___    100 ACTTATGCGCATTCATTTTG--TATCAATAAATGTACGGTTGGTGAAAAG    147
                     ||.|||||.||..|||||||  |.|||  |||||||||||.||.||||||
BL05229___ype    100 ACGTATGCCCACGCATTTTGCATTTCA--AAATGTACGGTCGGAGAAAAG    147

BSNT_03273___    148 CT--GAAACAATACGGAGATGT-CTTAACCAATCACTAA----    183
                     ||  |.|.|  ||.|||||.|| ||.|  |||.||..||    
BL05229___ype    148 CTCCGCACC--TATGGAGACGTGCTGA--CAAACAAAAATTGA    186


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