Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03270 and BL05226

See Amino acid alignment / Visit BSNT_03270 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:56
# Commandline: needle
#    -asequence dna-align/BSNT_03270___cspD.1.5803.seq
#    -bsequence dna-align/BL05226___cspD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03270___cspD-BL05226___cspD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03270___cspD-BL05226___cspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03270___cspD
# 2: BL05226___cspD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity:     182/201 (90.5%)
# Similarity:   182/201 (90.5%)
# Gaps:           0/201 ( 0.0%)
# Score: 834.0
# 
#
#=======================================

BSNT_03270___      1 ATGCAAAACGGTAAAGTAAAATGGTTCAACAACGAAAAAGGATTCGGCTT     50
                     ||||||||||||||||||||||||||.|||||.||||||||.||||||||
BL05226___csp      1 ATGCAAAACGGTAAAGTAAAATGGTTTAACAATGAAAAAGGCTTCGGCTT     50

BSNT_03270___     51 CATTGAAGTTGAAGGCGGAGACGATGTATTTGTTCACTTCACAGCTATCG    100
                     |||.||||||||||||||||||||||||||.|||||.|||||.||.||||
BL05226___csp     51 CATCGAAGTTGAAGGCGGAGACGATGTATTCGTTCATTTCACTGCAATCG    100

BSNT_03270___    101 AAGGAGATGGATACAAATCATTAGAAGAAGGACAAGAAGTTTCTTTTGAA    150
                     ||||.||.|||||||||||..|||||||||||||||||||||||||.|||
BL05226___csp    101 AAGGTGAAGGATACAAATCTCTAGAAGAAGGACAAGAAGTTTCTTTCGAA    150

BSNT_03270___    151 ATTGTCGAAGGTAATCGTGGACCTCAAGCTTCTAATGTTGTAAAACTCTA    200
                     |||||.|||||||||||||||||||||||.|||||.|||||.||.||.||
BL05226___csp    151 ATTGTTGAAGGTAATCGTGGACCTCAAGCATCTAACGTTGTGAAGCTTTA    200

BSNT_03270___    201 A    201
                     |
BL05226___csp    201 A    201


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