Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03258 and BL05225

See Amino acid alignment / Visit BSNT_03258 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:55
# Commandline: needle
#    -asequence dna-align/BSNT_03258___ilvD.1.5803.seq
#    -bsequence dna-align/BL05225___ilvD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03258___ilvD-BL05225___ilvD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03258___ilvD-BL05225___ilvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03258___ilvD
# 2: BL05225___ilvD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1684
# Identity:    1335/1684 (79.3%)
# Similarity:  1335/1684 (79.3%)
# Gaps:          14/1684 ( 0.8%)
# Score: 5252.0
# 
#
#=======================================

BSNT_03258___      1 ATGGCAGAATTACGCAGTAATATGATCACACAAGGAATCGATAGAGCTCC     50
                     |||.|||..|||||||||.|.|||||.|||.||||.|||||.|||||.||
BL05225___ilv      1 ATGACAGGTTTACGCAGTGACATGATTACAAAAGGGATCGACAGAGCGCC     50

BSNT_03258___     51 GCACCGCAGTTTGCTTCGTGCAGCAGGAGTAAAAGAAGAGGATTTCGGCA    100
                     |||||||||||||||.||.||.||.||.||||||||||||||.|||||||
BL05225___ilv     51 GCACCGCAGTTTGCTGCGCGCGGCTGGGGTAAAAGAAGAGGACTTCGGCA    100

BSNT_03258___    101 AGCCGTTTATTGCGGTGTGTAATTCATACATTGATATCGTTCCCGGTCAT    150
                     |.|||||||||||.||.||.||.||||||||.||||||||.||.||||||
BL05225___ilv    101 AACCGTTTATTGCCGTTTGCAACTCATACATCGATATCGTACCGGGTCAT    150

BSNT_03258___    151 GTTCACTTGCAGGAGTTTGGGAAAATCGTAAAAGAAGCAATCAGAGAAGC    200
                     ||.||.||||||||||||||.||||||||.|||||.||.||||||||.||
BL05225___ilv    151 GTCCATTTGCAGGAGTTTGGAAAAATCGTCAAAGAGGCGATCAGAGAGGC    200

BSNT_03258___    201 AGGGGGCGTTCCGTTTGAATTTAATACCATTGGGGTAGATGATGGTATCG    250
                     .||.||.||||||||||||||||||||.||.|||||.||.||.||.||.|
BL05225___ilv    201 CGGCGGTGTTCCGTTTGAATTTAATACAATCGGGGTCGACGACGGAATTG    250

BSNT_03258___    251 CAATGGGGCATATCGGTATGAGATATTCGCTGCCAAGCCGTGAAATTATC    300
                     |.||||||||.|||||.|||||.|||||.||.||.|||||.|||||.|||
BL05225___ilv    251 CGATGGGGCACATCGGAATGAGGTATTCTCTCCCGAGCCGCGAAATCATC    300

BSNT_03258___    301 GCAGACTCTGTGGAAACGGTTGTATCCGCACATTGGTTTGACGGAATGGT    350
                     |||||.||.|||||||||||||||||.||.||.|||||||||||||||||
BL05225___ilv    301 GCAGATTCAGTGGAAACGGTTGTATCGGCGCACTGGTTTGACGGAATGGT    350

BSNT_03258___    351 CTGTATTCCGAACTGCGACAAAATCACACCGGGAATGCTTATGGCGGCAA    400
                     .||||||||.|||||.||.||||||||||||||.|||.|.||||||||||
BL05225___ilv    351 ATGTATTCCAAACTGTGATAAAATCACACCGGGCATGATCATGGCGGCAA    400

BSNT_03258___    401 TGCGCATCAACATTCCGACGATTTTTGTCAGCGGCGGACCGATGGCGGCA    450
                     ||||.||||||||||||||..|.|||||||||||.||.|||||||..||.
BL05225___ilv    401 TGCGGATCAACATTCCGACCGTGTTTGTCAGCGGGGGGCCGATGGAAGCG    450

BSNT_03258___    451 GGAAGAACAAGTGACGGGCGAAAAATCTCCCTTTCCTCAGTATTCGAAGG    500
                     ||||||||.||.|||||.|||||||||||.||||||||.|||||.|||||
BL05225___ilv    451 GGAAGAACGAGCGACGGACGAAAAATCTCGCTTTCCTCTGTATTTGAAGG    500

BSNT_03258___    501 GGTAGGCGCCTACCAAGCAGGGAAAATCAACGA-AAACGAGCTTCAAGAA    549
                     .||.|||||.||.|||.||||.||||||.|.|| |||.|| ||..|.||.
BL05225___ilv    501 CGTTGGCGCTTATCAATCAGGCAAAATCGATGAGAAAGGA-CTCGAGGAG    549

BSNT_03258___    550 CTAGAGCAGTTCGGATGCCCAACGTGCGGGTCTTGCTCAGGCATGTTTAC    599
                     ||.||.||||||||.||.||.||.|||||.||.|||||.|||||||||||
BL05225___ilv    550 CTTGAACAGTTCGGCTGTCCGACTTGCGGATCATGCTCGGGCATGTTTAC    599

BSNT_03258___    600 GGCGAACTCAATGAACTGTCTGTCAGAAGCACTTGGTCTTGCCTTGCCGG    649
                     |||||||||.|||||||||||.||.|||||.|||||..|.|||.||||||
BL05225___ilv    600 GGCGAACTCGATGAACTGTCTTTCTGAAGCTCTTGGCATCGCCATGCCGG    649

BSNT_03258___    650 GTAATGGAACCATTCTGGCGACATCTCCGGAACGCAAAGAGTTTGTGAGA    699
                     |.||.||.||||||.||||||||||.||.||.||||..||.||||..|.|
BL05225___ilv    650 GCAACGGCACCATTTTGGCGACATCGCCCGACCGCAGGGAATTTGCCAAA    699

BSNT_03258___    700 AAATCGGCTGCG-CAATTAATGGA----AACGATTCGCAAAGATATCAAA    744
                     .|.||||| .|| ||..|.|||||    |.|.|.|||    |||||||||
BL05225___ilv    700 CAGTCGGC-CCGCCAGCTGATGGAGCTGATCAAGTCG----GATATCAAA    744

BSNT_03258___    745 CCGCGTGATATCGTTACAGTAAAAGCGATTGATAACGCGTTTGCACTCGA    794
                     |||||.||.|||||.||.|.|||||||||.||.||||||||.||..|.||
BL05225___ilv    745 CCGCGCGACATCGTGACCGAAAAAGCGATCGACAACGCGTTCGCTTTAGA    794

BSNT_03258___    795 TATGGCGCTCGGAGGTTCTACAAATACCGTTCTTCATACGCTTGCCCTTG    844
                     .|||||||||||.||.||.||.|||||..|.||||||||||||||..|.|
BL05225___ilv    795 CATGGCGCTCGGCGGATCAACGAATACGATCCTTCATACGCTTGCGATCG    844

BSNT_03258___    845 CAAACGAAGCCGGCGTTGAATACTCTTTAGAACGCATTAACGAAGTCGCT    894
                     |.||.|||||.||.||.||.||.||..|.|||||.||.||.||.||.||.
BL05225___ilv    845 CCAATGAAGCGGGTGTAGACTATTCGCTTGAACGGATCAATGAGGTAGCG    894

BSNT_03258___    895 GAGCGCGTGCCGCACTTGGCCAAGCTGGCGCCTGCATCGGATGTGTTTAT    944
                     |...|.||.|||||.||..|.|||||.||.||.||.||.|||||||||||
BL05225___ilv    895 GCAAGGGTTCCGCATTTATCGAAGCTTGCACCGGCTTCCGATGTGTTTAT    944

BSNT_03258___    945 TGAAGATCTTCATGAAGCGGGCGGCGTGTCAGCGGCTC-TGAATGAGCTT    993
                     |||||||.|.||||||||.||.|||||.||.||.| || |.||.|||||.
BL05225___ilv    945 TGAAGATTTGCATGAAGCAGGAGGCGTATCGGCAG-TCTTAAACGAGCTG    993

BSNT_03258___    994 TCCAAGAAAGAAGGAGCGCTTCATTTAGATGCGCTGACTGTTACAGGAAA   1043
                     ||.||.||||||||.||||||||.||.|||.||||||||||.||.||.||
BL05225___ilv    994 TCGAAAAAAGAAGGCGCGCTTCACTTGGATACGCTGACTGTAACGGGGAA   1043

BSNT_03258___   1044 AACTCTTGGAGAAACCATTGCCGGACATGAAGTAAAGGATTATGACGTCA   1093
                     |||.|||||.||||..||||||||||..|||||.||.|||||.||.||||
BL05225___ilv   1044 AACGCTTGGCGAAAATATTGCCGGACGCGAAGTGAAAGATTACGAGGTCA   1093

BSNT_03258___   1094 TTCATCCGCTGGATCAACCATTCACTGAAAAGGGTGGCCTTGCTGTTTTA   1143
                     ||||||||.|.|||||.||.||..|.||..|.||.||.||.||.||..|.
BL05225___ilv   1094 TTCATCCGATCGATCAGCCGTTTTCAGAGCAAGGCGGACTCGCCGTCCTG   1143

BSNT_03258___   1144 TTCGGTAATCTAGCTCCGGACGGCGCTATCATTAAAACAGGCGGCGTACA   1193
                     |||||.||.||.|||||.|||||.||.|||||||||||.||||||||.||
BL05225___ilv   1144 TTCGGCAACCTGGCTCCTGACGGTGCGATCATTAAAACGGGCGGCGTCCA   1193

BSNT_03258___   1194 GAATGGGATTACAAGACACGAAGGGCCGGCTGTCGTATTCGATTCTCAGG   1243
                     ..|.||||||||..|.||.|||||.||.||.||.||.||.|||||.||||
BL05225___ilv   1194 AGACGGGATTACCCGCCATGAAGGACCTGCGGTTGTCTTTGATTCACAGG   1243

BSNT_03258___   1244 ACGAGGCGCTTGACGGCATTATCAACCGAAAAGTAAAAGAAGGCGACGTT   1293
                     |.||.||||||||||||||.||||||||.||||||||||..||.||.||.
BL05225___ilv   1244 AAGAAGCGCTTGACGGCATCATCAACCGTAAAGTAAAAGCGGGAGATGTC   1293

BSNT_03258___   1294 GTTATCATCAGATATGAAGGGCCAAAAGGCGGACCTGGCATGCCGGAAAT   1343
                     ||.||||||.|.||||||||.||.|||||||||||.||.|||||.|||||
BL05225___ilv   1294 GTCATCATCCGCTATGAAGGCCCTAAAGGCGGACCGGGAATGCCTGAAAT   1343

BSNT_03258___   1344 GCTGGCGCCAACATCCCAAATCGTTGGAATGGGACTCGGACCAAAAGTGG   1393
                     |||.|||||.||.||.||.|||||.||||||||.|||||.||.|||||.|
BL05225___ilv   1344 GCTTGCGCCGACTTCACAGATCGTCGGAATGGGCCTCGGCCCGAAAGTCG   1393

BSNT_03258___   1394 CATTGATTACGGACGGACGTTTTTCCGGAGCCTCCCGTGGCCTCTCAATC   1443
                     |.||||||||.|||||.||.|||||.|||||||||||.||.||.||.|||
BL05225___ilv   1394 CCTTGATTACCGACGGCCGCTTTTCAGGAGCCTCCCGCGGTCTTTCGATC   1443

BSNT_03258___   1444 GGCCACGTATCACCTGAGGCAGCTGAGGGCGGGCCGCTTGCCTTTGTTGA   1493
                     ||||||||.|||||.||.|||||.||.|||||.||||||||.||.||.||
BL05225___ilv   1444 GGCCACGTTTCACCGGAAGCAGCCGAAGGCGGCCCGCTTGCTTTCGTAGA   1493

BSNT_03258___   1494 AAACGGAGACCATATTATCGTTGATATTGAAAAACGTATCTTGGATGTAC   1543
                     ||||||.||||||||..|.||.|||||.|||||.||.||.||..|..|..
BL05225___ilv   1494 AAACGGCGACCATATCGTTGTCGATATCGAAAAGCGGATTTTAAACATCG   1543

BSNT_03258___   1544 AAGTGCCAGAAGAAGAGTGGGAAAAACGAAAAGCGAACTGGAAAGGTTTT   1593
                     ||.|..|.||.||.||.|||||||||.|||||||.||||||...||.|||
BL05225___ilv   1544 AAATCTCCGATGAGGAATGGGAAAAAAGAAAAGCAAACTGGCCCGGCTTT   1593

BSNT_03258___   1594 GAACCGAAAGTGAAAACCGGCTACCTGGCACGTTATTCTAAACTTGTGAC   1643
                     |||||||||||||||||.|||||.||.||..|.|||||.||.||||||||
BL05225___ilv   1594 GAACCGAAAGTGAAAACGGGCTATCTCGCCAGGTATTCAAAGCTTGTGAC   1643

BSNT_03258___   1644 GAGTGCCAACACCGGCGGTATTATGAAAATCTAG   1677
                     ...||||||.||||||||.|||||||||||||||
BL05225___ilv   1644 ATCTGCCAATACCGGCGGCATTATGAAAATCTAG   1677


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