Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03258 and BL05225
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:55
# Commandline: needle
# -asequence dna-align/BSNT_03258___ilvD.1.5803.seq
# -bsequence dna-align/BL05225___ilvD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03258___ilvD-BL05225___ilvD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03258___ilvD-BL05225___ilvD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03258___ilvD
# 2: BL05225___ilvD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1684
# Identity: 1335/1684 (79.3%)
# Similarity: 1335/1684 (79.3%)
# Gaps: 14/1684 ( 0.8%)
# Score: 5252.0
#
#
#=======================================
BSNT_03258___ 1 ATGGCAGAATTACGCAGTAATATGATCACACAAGGAATCGATAGAGCTCC 50
|||.|||..|||||||||.|.|||||.|||.||||.|||||.|||||.||
BL05225___ilv 1 ATGACAGGTTTACGCAGTGACATGATTACAAAAGGGATCGACAGAGCGCC 50
BSNT_03258___ 51 GCACCGCAGTTTGCTTCGTGCAGCAGGAGTAAAAGAAGAGGATTTCGGCA 100
|||||||||||||||.||.||.||.||.||||||||||||||.|||||||
BL05225___ilv 51 GCACCGCAGTTTGCTGCGCGCGGCTGGGGTAAAAGAAGAGGACTTCGGCA 100
BSNT_03258___ 101 AGCCGTTTATTGCGGTGTGTAATTCATACATTGATATCGTTCCCGGTCAT 150
|.|||||||||||.||.||.||.||||||||.||||||||.||.||||||
BL05225___ilv 101 AACCGTTTATTGCCGTTTGCAACTCATACATCGATATCGTACCGGGTCAT 150
BSNT_03258___ 151 GTTCACTTGCAGGAGTTTGGGAAAATCGTAAAAGAAGCAATCAGAGAAGC 200
||.||.||||||||||||||.||||||||.|||||.||.||||||||.||
BL05225___ilv 151 GTCCATTTGCAGGAGTTTGGAAAAATCGTCAAAGAGGCGATCAGAGAGGC 200
BSNT_03258___ 201 AGGGGGCGTTCCGTTTGAATTTAATACCATTGGGGTAGATGATGGTATCG 250
.||.||.||||||||||||||||||||.||.|||||.||.||.||.||.|
BL05225___ilv 201 CGGCGGTGTTCCGTTTGAATTTAATACAATCGGGGTCGACGACGGAATTG 250
BSNT_03258___ 251 CAATGGGGCATATCGGTATGAGATATTCGCTGCCAAGCCGTGAAATTATC 300
|.||||||||.|||||.|||||.|||||.||.||.|||||.|||||.|||
BL05225___ilv 251 CGATGGGGCACATCGGAATGAGGTATTCTCTCCCGAGCCGCGAAATCATC 300
BSNT_03258___ 301 GCAGACTCTGTGGAAACGGTTGTATCCGCACATTGGTTTGACGGAATGGT 350
|||||.||.|||||||||||||||||.||.||.|||||||||||||||||
BL05225___ilv 301 GCAGATTCAGTGGAAACGGTTGTATCGGCGCACTGGTTTGACGGAATGGT 350
BSNT_03258___ 351 CTGTATTCCGAACTGCGACAAAATCACACCGGGAATGCTTATGGCGGCAA 400
.||||||||.|||||.||.||||||||||||||.|||.|.||||||||||
BL05225___ilv 351 ATGTATTCCAAACTGTGATAAAATCACACCGGGCATGATCATGGCGGCAA 400
BSNT_03258___ 401 TGCGCATCAACATTCCGACGATTTTTGTCAGCGGCGGACCGATGGCGGCA 450
||||.||||||||||||||..|.|||||||||||.||.|||||||..||.
BL05225___ilv 401 TGCGGATCAACATTCCGACCGTGTTTGTCAGCGGGGGGCCGATGGAAGCG 450
BSNT_03258___ 451 GGAAGAACAAGTGACGGGCGAAAAATCTCCCTTTCCTCAGTATTCGAAGG 500
||||||||.||.|||||.|||||||||||.||||||||.|||||.|||||
BL05225___ilv 451 GGAAGAACGAGCGACGGACGAAAAATCTCGCTTTCCTCTGTATTTGAAGG 500
BSNT_03258___ 501 GGTAGGCGCCTACCAAGCAGGGAAAATCAACGA-AAACGAGCTTCAAGAA 549
.||.|||||.||.|||.||||.||||||.|.|| |||.|| ||..|.||.
BL05225___ilv 501 CGTTGGCGCTTATCAATCAGGCAAAATCGATGAGAAAGGA-CTCGAGGAG 549
BSNT_03258___ 550 CTAGAGCAGTTCGGATGCCCAACGTGCGGGTCTTGCTCAGGCATGTTTAC 599
||.||.||||||||.||.||.||.|||||.||.|||||.|||||||||||
BL05225___ilv 550 CTTGAACAGTTCGGCTGTCCGACTTGCGGATCATGCTCGGGCATGTTTAC 599
BSNT_03258___ 600 GGCGAACTCAATGAACTGTCTGTCAGAAGCACTTGGTCTTGCCTTGCCGG 649
|||||||||.|||||||||||.||.|||||.|||||..|.|||.||||||
BL05225___ilv 600 GGCGAACTCGATGAACTGTCTTTCTGAAGCTCTTGGCATCGCCATGCCGG 649
BSNT_03258___ 650 GTAATGGAACCATTCTGGCGACATCTCCGGAACGCAAAGAGTTTGTGAGA 699
|.||.||.||||||.||||||||||.||.||.||||..||.||||..|.|
BL05225___ilv 650 GCAACGGCACCATTTTGGCGACATCGCCCGACCGCAGGGAATTTGCCAAA 699
BSNT_03258___ 700 AAATCGGCTGCG-CAATTAATGGA----AACGATTCGCAAAGATATCAAA 744
.|.||||| .|| ||..|.||||| |.|.|.||| |||||||||
BL05225___ilv 700 CAGTCGGC-CCGCCAGCTGATGGAGCTGATCAAGTCG----GATATCAAA 744
BSNT_03258___ 745 CCGCGTGATATCGTTACAGTAAAAGCGATTGATAACGCGTTTGCACTCGA 794
|||||.||.|||||.||.|.|||||||||.||.||||||||.||..|.||
BL05225___ilv 745 CCGCGCGACATCGTGACCGAAAAAGCGATCGACAACGCGTTCGCTTTAGA 794
BSNT_03258___ 795 TATGGCGCTCGGAGGTTCTACAAATACCGTTCTTCATACGCTTGCCCTTG 844
.|||||||||||.||.||.||.|||||..|.||||||||||||||..|.|
BL05225___ilv 795 CATGGCGCTCGGCGGATCAACGAATACGATCCTTCATACGCTTGCGATCG 844
BSNT_03258___ 845 CAAACGAAGCCGGCGTTGAATACTCTTTAGAACGCATTAACGAAGTCGCT 894
|.||.|||||.||.||.||.||.||..|.|||||.||.||.||.||.||.
BL05225___ilv 845 CCAATGAAGCGGGTGTAGACTATTCGCTTGAACGGATCAATGAGGTAGCG 894
BSNT_03258___ 895 GAGCGCGTGCCGCACTTGGCCAAGCTGGCGCCTGCATCGGATGTGTTTAT 944
|...|.||.|||||.||..|.|||||.||.||.||.||.|||||||||||
BL05225___ilv 895 GCAAGGGTTCCGCATTTATCGAAGCTTGCACCGGCTTCCGATGTGTTTAT 944
BSNT_03258___ 945 TGAAGATCTTCATGAAGCGGGCGGCGTGTCAGCGGCTC-TGAATGAGCTT 993
|||||||.|.||||||||.||.|||||.||.||.| || |.||.|||||.
BL05225___ilv 945 TGAAGATTTGCATGAAGCAGGAGGCGTATCGGCAG-TCTTAAACGAGCTG 993
BSNT_03258___ 994 TCCAAGAAAGAAGGAGCGCTTCATTTAGATGCGCTGACTGTTACAGGAAA 1043
||.||.||||||||.||||||||.||.|||.||||||||||.||.||.||
BL05225___ilv 994 TCGAAAAAAGAAGGCGCGCTTCACTTGGATACGCTGACTGTAACGGGGAA 1043
BSNT_03258___ 1044 AACTCTTGGAGAAACCATTGCCGGACATGAAGTAAAGGATTATGACGTCA 1093
|||.|||||.||||..||||||||||..|||||.||.|||||.||.||||
BL05225___ilv 1044 AACGCTTGGCGAAAATATTGCCGGACGCGAAGTGAAAGATTACGAGGTCA 1093
BSNT_03258___ 1094 TTCATCCGCTGGATCAACCATTCACTGAAAAGGGTGGCCTTGCTGTTTTA 1143
||||||||.|.|||||.||.||..|.||..|.||.||.||.||.||..|.
BL05225___ilv 1094 TTCATCCGATCGATCAGCCGTTTTCAGAGCAAGGCGGACTCGCCGTCCTG 1143
BSNT_03258___ 1144 TTCGGTAATCTAGCTCCGGACGGCGCTATCATTAAAACAGGCGGCGTACA 1193
|||||.||.||.|||||.|||||.||.|||||||||||.||||||||.||
BL05225___ilv 1144 TTCGGCAACCTGGCTCCTGACGGTGCGATCATTAAAACGGGCGGCGTCCA 1193
BSNT_03258___ 1194 GAATGGGATTACAAGACACGAAGGGCCGGCTGTCGTATTCGATTCTCAGG 1243
..|.||||||||..|.||.|||||.||.||.||.||.||.|||||.||||
BL05225___ilv 1194 AGACGGGATTACCCGCCATGAAGGACCTGCGGTTGTCTTTGATTCACAGG 1243
BSNT_03258___ 1244 ACGAGGCGCTTGACGGCATTATCAACCGAAAAGTAAAAGAAGGCGACGTT 1293
|.||.||||||||||||||.||||||||.||||||||||..||.||.||.
BL05225___ilv 1244 AAGAAGCGCTTGACGGCATCATCAACCGTAAAGTAAAAGCGGGAGATGTC 1293
BSNT_03258___ 1294 GTTATCATCAGATATGAAGGGCCAAAAGGCGGACCTGGCATGCCGGAAAT 1343
||.||||||.|.||||||||.||.|||||||||||.||.|||||.|||||
BL05225___ilv 1294 GTCATCATCCGCTATGAAGGCCCTAAAGGCGGACCGGGAATGCCTGAAAT 1343
BSNT_03258___ 1344 GCTGGCGCCAACATCCCAAATCGTTGGAATGGGACTCGGACCAAAAGTGG 1393
|||.|||||.||.||.||.|||||.||||||||.|||||.||.|||||.|
BL05225___ilv 1344 GCTTGCGCCGACTTCACAGATCGTCGGAATGGGCCTCGGCCCGAAAGTCG 1393
BSNT_03258___ 1394 CATTGATTACGGACGGACGTTTTTCCGGAGCCTCCCGTGGCCTCTCAATC 1443
|.||||||||.|||||.||.|||||.|||||||||||.||.||.||.|||
BL05225___ilv 1394 CCTTGATTACCGACGGCCGCTTTTCAGGAGCCTCCCGCGGTCTTTCGATC 1443
BSNT_03258___ 1444 GGCCACGTATCACCTGAGGCAGCTGAGGGCGGGCCGCTTGCCTTTGTTGA 1493
||||||||.|||||.||.|||||.||.|||||.||||||||.||.||.||
BL05225___ilv 1444 GGCCACGTTTCACCGGAAGCAGCCGAAGGCGGCCCGCTTGCTTTCGTAGA 1493
BSNT_03258___ 1494 AAACGGAGACCATATTATCGTTGATATTGAAAAACGTATCTTGGATGTAC 1543
||||||.||||||||..|.||.|||||.|||||.||.||.||..|..|..
BL05225___ilv 1494 AAACGGCGACCATATCGTTGTCGATATCGAAAAGCGGATTTTAAACATCG 1543
BSNT_03258___ 1544 AAGTGCCAGAAGAAGAGTGGGAAAAACGAAAAGCGAACTGGAAAGGTTTT 1593
||.|..|.||.||.||.|||||||||.|||||||.||||||...||.|||
BL05225___ilv 1544 AAATCTCCGATGAGGAATGGGAAAAAAGAAAAGCAAACTGGCCCGGCTTT 1593
BSNT_03258___ 1594 GAACCGAAAGTGAAAACCGGCTACCTGGCACGTTATTCTAAACTTGTGAC 1643
|||||||||||||||||.|||||.||.||..|.|||||.||.||||||||
BL05225___ilv 1594 GAACCGAAAGTGAAAACGGGCTATCTCGCCAGGTATTCAAAGCTTGTGAC 1643
BSNT_03258___ 1644 GAGTGCCAACACCGGCGGTATTATGAAAATCTAG 1677
...||||||.||||||||.|||||||||||||||
BL05225___ilv 1644 ATCTGCCAATACCGGCGGCATTATGAAAATCTAG 1677
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