Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03183 and BL05216
See
Amino acid alignment /
Visit
BSNT_03183 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03183.1.5803.seq
# -bsequence dna-align/BL05216.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03183-BL05216.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03183-BL05216.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03183
# 2: BL05216
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 219/363 (60.3%)
# Similarity: 219/363 (60.3%)
# Gaps: 60/363 (16.5%)
# Score: 577.0
#
#
#=======================================
BSNT_03183 1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAA-CAGAAGGCTGTAG 49
|||||.||||||||...|||..|.|..|||||.||| ..||||....||
BL05216 1 ATGGGCACAAGAGTACATTACGCAGAAGAAGTAAAATGGGAAGTAATTA- 49
BSNT_03183 50 AAATGAGATTGGCAGGC-GTACCTATG------AAAGAGATCATGCAGGA 92
||||||.| ||.|| |.| ||| |||||.||.|||.|..|
BL05216 50 AAATGAAA----CAAGCTGGA---ATGACAAACAAAGAAATAATGGAACA 92
BSNT_03183 93 GTTGAATATCAAAAATAATACGCAGATTAAGACATGGGTCAGATGGTATA 142
..||...||.||||||||.||.||.|||||.||||||.|..|||||||.|
BL05216 93 ACTGGGGATAAAAAATAAGACTCAAATTAAAACATGGATGCGATGGTACA 142
BSNT_03183 143 AGGCTGGTGATACACATCGATTTGAACAGCCTGTTGGTAAGCAATACACT 192
|..|.||..|.||..||||||||...||.|..|||||.||.|||||..|.
BL05216 143 AAACAGGCCAAACCTATCGATTTTCGCAACAAGTTGGAAAACAATATTCC 192
BSNT_03183 193 TATGGAAAAGGTCCGGAGTATTCTTCCGAATTAGAG-------------- 228
||.||.||||...|||||.| |||.||.|
BL05216 193 TACGGTAAAGAATCGGAGGA--------AATGAGTGAGCTAGAAGAATTA 234
BSNT_03183 229 AAACTGCAGGCAGAGAATCGATATCTGAGA----CAACAG--AATGAAGT 272
||||| |.|||||..|.|.|| ||| |||..| |||.|
BL05216 235 AAACT------AAAGAATAAACAGCT-AGAGGCTCAATTGGCAATTA--- 274
BSNT_03183 273 GTTAAAAAAGTACAACGAATTGGAAAGGAAGTTGATAGCCAAACGTCA-- 320
|||||||||||.|.||..|.|||||| ||||| .|||||...||||
BL05216 275 --TAAAAAAGTACCAGGAGATCGAAAGG-AGTTG-GAGCCACGAGTCATT 320
BSNT_03183 321 GTCGAACTTGTAG 333
|||.||.||||||
BL05216 321 GTCCAAGTTGTAG 333
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.