Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03143 and BL05215

See Amino acid alignment / Visit BSNT_03143 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:48
# Commandline: needle
#    -asequence dna-align/BSNT_03143___yozO.1.5803.seq
#    -bsequence dna-align/BL05215.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03143___yozO-BL05215.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03143___yozO-BL05215.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: BL05215
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity:      85/349 (24.4%)
# Similarity:    85/349 (24.4%)
# Gaps:         230/349 (65.9%)
# Score: 247.0
# 
#
#=======================================

BSNT_03143___      1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC     50
                                                                       
BL05215            0 --------------------------------------------------      0

BSNT_03143___     51 TTTGCTCGTTGAAGGGGAAAGAATAGAATCGATTTATAAGCTCCGAGTGG    100
                                                                       
BL05215            0 --------------------------------------------------      0

BSNT_03143___    101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAAAATG    150
                                                                       
BL05215            0 --------------------------------------------------      0

BSNT_03143___    151 TTTTCTAAAAAGAAGGTTCGTGTATTTCTTCCATATAAAACAATTGAAAG    200
                                                                       
BL05215            0 --------------------------------------------------      0

BSNT_03143___    201 CTTTGCCATTCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCTTTTAT    250
                                           |||||..||||.||||.|...||||...
BL05215            1 ----------------------ATGTTCAATCCAGACAGTTCTCTTTCTC     28

BSNT_03143___    251 TGATGACAAGAAGCAAAACGTTCGAATTAGAATTTGCGAAAGACACCGAT    300
                     |||||||.||.|||||||..||.||..|.||||||.||||.||.||||| 
BL05215           29 TGATGACCAGCAGCAAAATCTTTGATCTGGAATTTACGAAGGATACCGA-     77

BSNT_03143___    301 TTAAGC--GAGGTTCAGGCGGTGCTGACAAA--GCATTTGTGCAGCTGA    345
                      .|.||  ||..||||.|||.||.|..||||  .|.|.||||||  |.|
BL05215           78 -CATGCTTGAAATTCAAGCGCTGTTATCAAAATACTTATGTGCA--TAA    123


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