Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03143 and BL05215
See
Amino acid alignment /
Visit
BSNT_03143 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_03143___yozO.1.5803.seq
# -bsequence dna-align/BL05215.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03143___yozO-BL05215.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03143___yozO-BL05215.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03143___yozO
# 2: BL05215
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 349
# Identity: 85/349 (24.4%)
# Similarity: 85/349 (24.4%)
# Gaps: 230/349 (65.9%)
# Score: 247.0
#
#
#=======================================
BSNT_03143___ 1 TTGGGTATTTTTTCTGTTAGCAGATCAACGGACGCAAAGAAGCTTGAGGC 50
BL05215 0 -------------------------------------------------- 0
BSNT_03143___ 51 TTTGCTCGTTGAAGGGGAAAGAATAGAATCGATTTATAAGCTCCGAGTGG 100
BL05215 0 -------------------------------------------------- 0
BSNT_03143___ 101 ACCAAATTTGCTTTACAAATAAGCGGATCATTTTCTTTGACAATAAAATG 150
BL05215 0 -------------------------------------------------- 0
BSNT_03143___ 151 TTTTCTAAAAAGAAGGTTCGTGTATTTCTTCCATATAAAACAATTGAAAG 200
BL05215 0 -------------------------------------------------- 0
BSNT_03143___ 201 CTTTGCCATTCAAGAAGCGGGAATGTTTGATCCGGACACTGGGCTTTTAT 250
|||||..||||.||||.|...||||...
BL05215 1 ----------------------ATGTTCAATCCAGACAGTTCTCTTTCTC 28
BSNT_03143___ 251 TGATGACAAGAAGCAAAACGTTCGAATTAGAATTTGCGAAAGACACCGAT 300
|||||||.||.|||||||..||.||..|.||||||.||||.||.|||||
BL05215 29 TGATGACCAGCAGCAAAATCTTTGATCTGGAATTTACGAAGGATACCGA- 77
BSNT_03143___ 301 TTAAGC--GAGGTTCAGGCGGTGCTGACAAA--GCATTTGTGCAGCTGA 345
.|.|| ||..||||.|||.||.|..|||| .|.|.|||||| |.|
BL05215 78 -CATGCTTGAAATTCAAGCGCTGTTATCAAAATACTTATGTGCA--TAA 123
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.