Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02064 and BL05207
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_02064.1.5803.seq
# -bsequence dna-align/BL05207___yjgC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02064-BL05207___yjgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02064-BL05207___yjgC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02064
# 2: BL05207___yjgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2958
# Identity: 1349/2958 (45.6%)
# Similarity: 1349/2958 (45.6%)
# Gaps: 1500/2958 (50.7%)
# Score: 6309.0
#
#
#=======================================
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1 ATGGCTGAACAGAAAAAAATCACAATAAACGGCGTTGAAATGGAAGCGTC 50
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 51 CGAGGAACAGACGGTGCTTCAGCTTTTGAATAACAGTTCGATTGAAGTGC 100
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 101 CGCAAATTTGCTATCATCCTAGCTTAGGGCCGATTGAAACATGTGATACG 150
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 151 TGCATCGTCAGCATCAATGGCGAGCTAAAGAGGTCGTGCTCCGCTGAAGT 200
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 201 AAAGGATGGAGACGTCATTGATACGCTTTCACCTGATGTGAAAAAAGCGC 250
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 251 AGGTCATTGGGATGGACAAGATTTTATATAATCATGAGCTTTATTGTACA 300
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 301 GTTTGCGATTACAACAACGGGGGATGCGAAATACATAATACGGTGAAGGA 350
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 351 AATGAAGGTCAATCACCAAAGCATCCCGTTTGATCAGAAGCCTTACCATA 400
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 401 AGGATGAATCAAATCCGTTTTACCGGTACGATCCGGATCAATGTATTTTG 450
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 451 TGCGGGCGTTGTGTTGAAGCGTGCCAGGACGTTCAGGTGACTGAAACACT 500
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 501 GACCATTGACTGGGAGCGGAAACGCCCACGCGTCATTTGGGATAATGATG 550
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 551 TGCCGATCAATGAGTCGTCGTGTGTATCATGCGGCCATTGTTCTACCGTC 600
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 601 TGTCCATGTAATGCGATGATGGAAAAAGGAATGGAGGGAGAAGCCGGATA 650
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 651 TTTAACAGGAATCGATGACGAAACGCTGCGTCCGATGATCGAGATCACAA 700
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 701 AAGGCGTAGAAACAGGTTACGGCTCTATTCTCGCCATTTCTGATATGGAA 750
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 751 TCCGCCATGCGTGACGAGCGAATTAAGAAAACAAAAACCGTCTGCACCTA 800
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 801 TTGCGGTGTCGGCTGCAGCTTTGATGTCTGGACAAAGGGCAGAGATATTC 850
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 851 TGAAAGTCGAGCCGCAGGAGGAAGCACCGGCCAACGGCATTTCTACTTGT 900
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 901 GTAAAAGGAAAATTCGGCTGGGATTTCATCAACAGCGAGGAGCGCTTGAC 950
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 951 AAAGCCGCTGATCCGCGAAGGCGACCATTTCCGTGAAGCGGAATGGGAGG 1000
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1001 AAGCGTTAACGCTGATCGCCAGCAAGTTCACGGATTTAAAAGAGGAGTTT 1050
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1051 GGCCCGGATTCACTTGCCTTTATTACATCTTCTAAATGTACAAACGAAGA 1100
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1101 ATCCTACCTCATGCAAAAGCTGGCGAGAGGGATCATCGGCACAAATAATG 1150
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1151 TCGACAACTGCTCGCGCTATTGCCAATCTCCTGCGACTGCCGGCCTGTTC 1200
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1201 CGGACAGTGGGCTATGGCGGTGACTCAGGGTCGATTGCAGATATCGCGCA 1250
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1251 AGCGGACCTTGTGTTGATTATCGGTTCGAACACGTCTGAGTCGCATCCGG 1300
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1301 TCTTGTCCACTCGCATTAAACGGGCTCATAAGCTGAGAGGGCAGAAAGTG 1350
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1351 ATCGTAGCGGATATCAGAAAACACGAAATGGCAGAGCGATCTGATCTGTT 1400
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1401 TGTTCAGCCGCGTGCCGGATCAGATATCGTCTGGCTGAATGCCATCGCCA 1450
BSNT_02064 0 -------------------------------------------------- 0
BL05207___yjg 1451 AATATTTAATTGAAAACGGCAAGGCCGATGAACGCTTTTTGCAGGAAAGA 1500
BSNT_02064 1 GTGAACGGACGGCATGAATATGTAAAAAGCATCGCGCCGTACACACTTGA 50
||||||||||||.||||||||||.||||||.||.|||||||.||.|||||
BL05207___yjg 1501 GTGAACGGACGGGATGAATATGTGAAAAGCCTCACGCCGTATACCCTTGA 1550
BSNT_02064 51 ATATGCTGAGGAGAAAACCGGGATTGATCAAGAAACCCTTATCCAAATGG 100
||||||.||||||||||||||||||||||||||||||||.||||||||||
BL05207___yjg 1551 ATATGCCGAGGAGAAAACCGGGATTGATCAAGAAACCCTCATCCAAATGG 1600
BSNT_02064 101 CAGAGATGATCGGGCAAGCTGACAGTGTGTGCGCATTGTGGGCGATGGGC 150
|.||||||||.||.||.||||||||||||||||||||||||||.|||||.
BL05207___yjg 1601 CGGAGATGATTGGCCAGGCTGACAGTGTGTGCGCATTGTGGGCCATGGGG 1650
BSNT_02064 151 GTGACACAGCACATTGGAGGAAGCGACACGAGCACGGCGATCTCTAACCT 200
|||||||||||.|||||.|||||||||||||||||.||.||||||||.||
BL05207___yjg 1651 GTGACACAGCATATTGGCGGAAGCGACACGAGCACAGCAATCTCTAATCT 1700
BSNT_02064 201 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCAGGTTCTTACCCAT 250
||||||||||||||||||||||||||||||||||||.||.||||||||||
BL05207___yjg 1701 GCTGCTTGTGACAGGAAACTACGGAAAACCGGGAGCGGGCTCTTACCCAT 1750
BSNT_02064 251 TGCGCGGTCATAATAACGTGCAGGGAGCAAGTGACTTCGGAAGTATGCCT 300
|||||||.|||||.|||||||||||||||||||||||||||||.||||||
BL05207___yjg 1751 TGCGCGGCCATAACAACGTGCAGGGAGCAAGTGACTTCGGAAGCATGCCT 1800
BSNT_02064 301 GACAGAATGCCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA 350
||||||.|||||||||||||||||||||||||||||||||||||||||||
BL05207___yjg 1801 GACAGACTGCCGGGCTATGAAAAAGTGACGGACGAACAAGTCCGCCAAAA 1850
BSNT_02064 351 ATACGAGCAGGCGTGGGGCGTGCCGCTGCCGAAGAAGCCGGGTATGACCA 400
||||||||||||.|||||.||.||||||||||||.|||||||.|||||||
BL05207___yjg 1851 ATACGAGCAGGCATGGGGTGTACCGCTGCCGAAGGAGCCGGGCATGACCA 1900
BSNT_02064 401 ACCACGAAATGATTGAAAAAATACATTCCGGACAGCTGAAAGCGATGTAT 450
|||||||||||||.||||||||.||.||.||..|||||||||||||||||
BL05207___yjg 1901 ACCACGAAATGATCGAAAAAATCCACTCTGGCAAGCTGAAAGCGATGTAT 1950
BSNT_02064 451 GTAAAAGGTGAAGAAATGGGCTTGGTGGATTCCAACATCAATCATGTACA 500
||||||||||||||||||||..||||.||||||||.||||||||||||||
BL05207___yjg 1951 GTAAAAGGTGAAGAAATGGGTCTGGTCGATTCCAATATCAATCATGTACA 2000
BSNT_02064 501 CGCCGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGACATTTTCCTTT 550
|||||||||||||||||||||||||||||||||||||||.||||||.|||
BL05207___yjg 2001 CGCCGCATATGAAAAGCTTGATTTCTTTGTGGTGCAGGATATTTTCTTTT 2050
BSNT_02064 551 CACGTACAGCGGAGTTTGCTGATGTGGTTCTTCCTGCGAGCCCAAGCCTT 600
||||||||||.||||||||.|||||.|||||||||||||||||.||||||
BL05207___yjg 2051 CACGTACAGCCGAGTTTGCCGATGTTGTTCTTCCTGCGAGCCCGAGCCTT 2100
BSNT_02064 601 GAAAAAGAAGGAACCTTTACAAACACAGAACGCCGGATTCAGCGTTTGTA 650
||||||||.|||||||||||||||||||||||||||||||||||..|.||
BL05207___yjg 2101 GAAAAAGAGGGAACCTTTACAAACACAGAACGCCGGATTCAGCGGCTTTA 2150
BSNT_02064 651 TCAGGTATTTGAACCGCTGGGTGAATCAAAGCTGGATTGGCAGATTATTA 700
||||||.||||||||||||||.||||||||||.|||||||||||||||||
BL05207___yjg 2151 TCAGGTGTTTGAACCGCTGGGCGAATCAAAGCCGGATTGGCAGATTATTA 2200
BSNT_02064 701 TGGAGGTTGCCAATAAGCTTGGCGCCGGTTGGCACTATGAGCATCCTGCA 750
||||.||||||||||||||||||||.|..||||||||||||||.|||||.
BL05207___yjg 2201 TGGAAGTTGCCAATAAGCTTGGCGCTGACTGGCACTATGAGCACCCTGCT 2250
BSNT_02064 751 GACATTATGGAGGAAGCAGCCAAGCTGTCGCCGATTTATGCCGGTGTCAC 800
|||||||||||||||||||||||||||||.|||||||||||.||||||||
BL05207___yjg 2251 GACATTATGGAGGAAGCAGCCAAGCTGTCTCCGATTTATGCGGGTGTCAC 2300
BSNT_02064 801 CTATAAACGTCTTGAGGGCTATCATTCCCTGCAATGGCCTGTAAACGCTG 850
||||.||||.|||||.|||||..|||||||||||||||||||||.|||||
BL05207___yjg 2301 CTATGAACGGCTTGAAGGCTACAATTCCCTGCAATGGCCTGTAAGCGCTG 2350
BSNT_02064 851 ATGGAAAGGATTCGCCTTTACTCTTTACAGAGCGCTTCCCTTTCCCGGAC 900
||||||||||||||||||||||.|||||.|||||||||||||||||.|||
BL05207___yjg 2351 ATGGAAAGGATTCGCCTTTACTTTTTACTGAGCGCTTCCCTTTCCCAGAC 2400
BSNT_02064 901 GGCAAGGCCATTCTCTACCCTGTCCAGTGGACAGAGCCTAAGGAATTCGG 950
|||||.|||||||||||.|||||.||.||||||||.|||.|.||.|||||
BL05207___yjg 2401 GGCAAAGCCATTCTCTATCCTGTGCATTGGACAGAACCTGAAGAGTTCGG 2450
BSNT_02064 951 TGAGGAATATGATATCCATGTCAACAATGGGCGGCTCTTGGAGCACTTCC 1000
.|||||||||||||||||.||||||||||||||||||||||||||.||||
BL05207___yjg 2451 AGAGGAATATGATATCCACGTCAACAATGGGCGGCTCTTGGAGCATTTCC 2500
BSNT_02064 1001 ACGAAGGGAACCTGACTTACAAATCAAAAGGGATTTCGGAGAAAACACCG 1050
||||||||||||||||.||||||||||||||.|||||..|||||||||||
BL05207___yjg 2501 ACGAAGGGAACCTGACCTACAAATCAAAAGGCATTTCAAAGAAAACACCG 2550
BSNT_02064 1051 GAAGTGTTCTTAGAAATTTCTCCTGAGCTTGCGGCAGAACGAGGGATTCA 1100
||||||||||||||||||||||||||.||.|||||||||.|.||||||||
BL05207___yjg 2551 GAAGTGTTCTTAGAAATTTCTCCTGAACTCGCGGCAGAAAGGGGGATTCA 2600
BSNT_02064 1101 GGACGGAACCCTCGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA 1150
||||||||||||.|||||||||||||||||||||||||||||||||||||
BL05207___yjg 2601 GGACGGAACCCTTGTCAGACTCACATCGCCTTTCGGAAATGTCAAAGTGA 2650
BSNT_02064 1151 AGTGCCTGATTACTGATCGAGTCAAAGGGAAGGAAGTATATCTGCCAATG 1200
|||||.||||.||||||||.||||||||||||||||||||||||||||||
BL05207___yjg 2651 AGTGCTTGATCACTGATCGTGTCAAAGGGAAGGAAGTATATCTGCCAATG 2700
BSNT_02064 1201 AACGATTCAGGGGAAGCGGCGATCAACCTGTTAACAGGCAGCCATGCCGA 1250
|||||||||||.|||||.|||||||||||||||||||||||||||||.||
BL05207___yjg 2701 AACGATTCAGGAGAAGCAGCGATCAACCTGTTAACAGGCAGCCATGCTGA 2750
BSNT_02064 1251 TAAGGATACCGATACGCCTGCTTACAAAGAAACATCGGCCAAGATGGAAA 1300
|||||||||||||||||||||.||||||||||||||.|||||||||||||
BL05207___yjg 2751 TAAGGATACCGATACGCCTGCGTACAAAGAAACATCAGCCAAGATGGAAA 2800
BSNT_02064 1301 TTTTGAAGCACGACGGAATCAGCCCGCTGCCTAAGATCAACCACCGCAAC 1350
|||||||||.||||||||.||..|||||||||||||||||.|||||||||
BL05207___yjg 2801 TTTTGAAGCGCGACGGAAGCAATCCGCTGCCTAAGATCAATCACCGCAAC 2850
BSNT_02064 1351 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTTCATAAGAAATGGGCGCG 1400
||||||||||||||||||||||||||||||||.||.||||||||||||||
BL05207___yjg 2851 GGCAATCCGCAGCCGCAAATCGGTGTGCAGGTACAAAAGAAATGGGCGCG 2900
BSNT_02064 1401 GAAGGATTATATTTTCCCTGGTGACGCTGTGAAAAGGGGGATGGGCCATA 1450
|||||||||||||||||||||.||||||||||||||||||||.||.||||
BL05207___yjg 2901 GAAGGATTATATTTTCCCTGGCGACGCTGTGAAAAGGGGGATTGGGCATA 2950
BSNT_02064 1451 ATGGCTAA 1458
|||||||.
BL05207___yjg 2951 ATGGCTAG 2958
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