Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03117 and BL05204
See
Amino acid alignment /
Visit
BSNT_03117 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_03117___yozB.1.5803.seq
# -bsequence dna-align/BL05204.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03117___yozB-BL05204.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03117___yozB-BL05204.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03117___yozB
# 2: BL05204
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 546
# Identity: 402/546 (73.6%)
# Similarity: 402/546 (73.6%)
# Gaps: 21/546 ( 3.8%)
# Score: 1384.0
#
#
#=======================================
BSNT_03117___ 1 ATGAACCAAACAGAAAATAAACCGAAAAATTACACGGGGATTGTCCTTAC 50
||||.|||.|||.||||.|| .|||||.|||||.||.|||||..||.|
BL05204 1 ATGACCCATACAAAAAAAAA---TAAAAACTACACAGGAATTGTTGTTGC 47
BSNT_03117___ 51 GCTGACAGTTCTGATTAACGGTTTAATCGCAGTGCTGTTTTTTATGCCTA 100
.|||||..||.|.||.|||||..|.||.||..|..|||||||||||||.|
BL05204 48 TCTGACGATTATCATAAACGGCGTCATTGCCCTCTTGTTTTTTATGCCGA 97
BSNT_03117___ 101 AATTAGATCAGTTCAGC-CATGCGAATATTCACATTT-TGCCAATGCTGA 148
||...||..|.||| || |||..|.|| ||.||.||| ||||..|..|||
BL05204 98 AAAGCGACAAATTC-GCTCATTTGGAT-TTGACTTTTCTGCCGCTTTTGA 145
BSNT_03117___ 149 ATGCGATATTCAACAGCTTTACGTTTATCTTCTTATTGGCCGCGCTGATT 198
|.||..|.|.|||||||||.||.||.||.||||||.||||.||.|||||.
BL05204 146 ACGCAGTCTGCAACAGCTTCACATTCATTTTCTTAGTGGCTGCACTGATC 195
BSNT_03117___ 199 ATGATTAAACAGAAAAATATCAAAGCTCACAAACGCTTTATTTTGGCCGC 248
|||||||||||||||||.||.|||||.||||||||.||||||||.|||||
BL05204 196 ATGATTAAACAGAAAAACATTAAAGCGCACAAACGGTTTATTTTTGCCGC 245
BSNT_03117___ 249 GTTCACAACAACATTACTATTTTTGATTTGCTATGTGACGTACCACTCGA 298
.||.||.|||||.||..|.|||.|..|.|..|||.||||.|||||.|| |
BL05204 246 TTTTACGACAACGTTCATCTTTCTCGTCTCATATTTGACCTACCATTC-A 294
BSNT_03117___ 299 TTG----CGGAAAACACGCTCTATGGCGGAGAAGGTATTATGCGCCCGAT 344
||| |.| ||||.|..|.||||||.|||||.|||||..|.|||||
BL05204 295 TTGATGCCTG---ACACTCATTTTGGCGGGGAAGGGATTATAAGACCGAT 341
BSNT_03117___ 345 TTATTTCTTTATTTTAATTACACATATCTGCCTT-TCTGCAATTATTGTG 393
.||.|..||||||||.||.|||||.|| ||.||| ||.||..|.||.||.
BL05204 342 CTACTATTTTATTTTGATCACACACAT-TGTCTTGTCCGCTTTAATCGTT 390
BSNT_03117___ 394 CCGCTTGCGC--TGTTTACGCTGATCAGAGGCTTCAGCATGCAGGTGGAG 441
|| |||| || ||||.||||||.||||||||.|.||||||||||||||.
BL05204 391 CC-CTTG-GCATTGTTCACGCTGTTCAGAGGCCTGAGCATGCAGGTGGAA 438
BSNT_03117___ 442 CGCCACAAAAAAATTGCGAGATGGACAATGCCTCTATGGCTGTATGTAAG 491
||||||...|||||.||..|.|||||.|||||.||.|||||||||||.||
BL05204 439 CGCCACCGCAAAATCGCCCGCTGGACGATGCCGCTTTGGCTGTATGTCAG 488
BSNT_03117___ 492 CCTTACAGGCGTTATTGTATATTTGATGATTTCACCGTATTACTAA 537
|||.|||||||||.|.||.|||.||||||||||.||.|||||.|||
BL05204 489 CCTGACAGGCGTTCTCGTCTATATGATGATTTCCCCATATTATTAA 534
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.