Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02958 and BL05189
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:38
# Commandline: needle
# -asequence dna-align/BSNT_02958___yneB.1.5803.seq
# -bsequence dna-align/BL05189___yneB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02958___yneB-BL05189___yneB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02958___yneB-BL05189___yneB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02958___yneB
# 2: BL05189___yneB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 671
# Identity: 457/671 (68.1%)
# Similarity: 457/671 (68.1%)
# Gaps: 40/671 ( 6.0%)
# Score: 1445.5
#
#
#=======================================
BSNT_02958___ 1 ATGAAAGCACTCATTTATGCCCGTGTAAGCACAAATAAAGAACAGCAGGA 50
|||||.||..|.|||||..||.|.||||||||....||.||.||||||||
BL05189___yne 1 ATGAATGCGATTATTTACACCAGGGTAAGCACTGCGAAGGAGCAGCAGGA 50
BSNT_02958___ 51 AACGTCATTAAAGCGGCAGGAGGAGGAGCTTACGGCCATTGCAGCGGAGA 100
|||.||||||||||||||||||||.|||||||.|.|..||||.||.||..
BL05189___yne 51 AACCTCATTAAAGCGGCAGGAGGAAGAGCTTAAGTCGCTTGCCGCCGAAC 100
BSNT_02958___ 101 ACGACATGGAAGTGGTCAAAGTGATTTCAGAAAAAGCCAGCGGATATGAA 150
|||..|||.|.||.||.|..||.|||||.||..|.||.||||||||||||
BL05189___yne 101 ACGGGATGAACGTCGTGAGCGTCATTTCCGAGCAGGCGAGCGGATATGAA 150
BSNT_02958___ 151 ATGGATCGGGATGGTGTATTTGAGCTGCTTGATGAGATTAAGAAC-GCTG 199
|||||.||.||.||.||.||.||.|||||.||.||.||.|| ||| .|.|
BL05189___yne 151 ATGGACCGCGACGGCGTCTTCGATCTGCTCGAGGAAATCAA-AACATCAG 199
BSNT_02958___ 200 GAATTGATGTCATTTTGGTTCAGGATGAGACAAGGCTCGGACGGGGAAAC 249
..||.||.|...||||..|.||||||||.||..||||.|||.|.||.||.
BL05189___yne 200 ACATCGACGCGGTTTTAATACAGGATGATACGCGGCTTGGAAGAGGGAAT 249
BSNT_02958___ 250 GCAAAAATCGCACTGCTTCATTGCATTTATAGAGAAGGTGTGAAAGTCTA 299
||.|||||.||.||.|||||.||..|.||||.||||||.||..||.||||
BL05189___yne 250 GCCAAAATTGCCCTTCTTCACTGTTTATATAAAGAAGGCGTTCAAATCTA 299
BSNT_02958___ 300 TACAACGGCTCATAGAGGTGAACTGGAGTTATCGGAGGCTGACTCAATGG 349
.||...||||||..|.||..|.||.|||.|.||.||.||.|||||.||||
BL05189___yne 300 CACGCTGGCTCACCGCGGAAAGCTCGAGCTTTCCGAAGCGGACTCGATGG 349
BSNT_02958___ 350 TCTTGGAAATCGTCAGCATTGTGGAAGAGTATCAGCGAAAGATTCACAAC 399
|.|||||.||.|||.|||||||.||.||.||.|||||.||.||.||.|||
BL05189___yne 350 TTTTGGAGATTGTCGGCATTGTCGAGGAATACCAGCGGAAAATACATAAC 399
BSNT_02958___ 400 ATGAAAATCAGACGGGGAATGAA-ACGTGCAGTAAAAAACGGTTTTAAAC 448
.|||||||.|..||||||||||| |.| ||.||..|||||||.| ||
BL05189___yne 400 CTGAAAATTAAGCGGGGAATGAAGAAG-GCGGTCGAAAACGGCT----AC 444
BSNT_02958___ 449 CGC----AAAAAAACTTAAAAAACCAACATGGGAA--CAGTGGAAAAGAA 492
||| |.|..|||.|||||.|||...|| ||| |.|.||.|.|||.
BL05189___yne 445 CGCCCGGAGAGGAACCTAAAACACCGCAAT--GAAGGCGGCGGGAGAGAG 492
BSNT_02958___ 493 AAAATAGAGGTGCCAATCTCTGAGATCGTCCGCCTAAGAGCGAATAAACT 542
..|||.||.|.|||..|.||.||.||||||.|.||.||.|.|||.||.||
BL05189___yne 493 CGAATCGAAGCGCCTCTTTCAGAAATCGTCAGGCTCAGGGAGAACAAGCT 542
BSNT_02958___ 543 GACGTTTGCTGAAATCGCGGCTACCC----TAAGAGGGTTTGGCTATGAT 588
|||||||||.||.||.|| |.|| |.|||||.||.||.||....
BL05189___yne 543 GACGTTTGCGGAGATTGC----AGCCGTGTTGAGAGGCTTCGGATACAGC 588
BSNT_02958___ 589 GTCTCTAAAGCAACCGTTCACCGGCGTTTTCAGGAATACATAGAGAATGA 638
.|.||.|||||||||||||||||.||.|..|||||.|| .|
BL05189___yne 589 ATATCAAAAGCAACCGTTCACCGCCGCTACCAGGAGTA----------TA 628
BSNT_02958___ 639 AGAGAC-----AGCAGAGTGA 654
|| ||| .|||||.|.|
BL05189___yne 629 AG-GACGGCCTTGCAGACTAA 648
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