Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02792 and BL05177
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02792___nrdI.1.5803.seq
# -bsequence dna-align/BL05177___nrdI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02792___nrdI-BL05177___nrdI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02792___nrdI-BL05177___nrdI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02792___nrdI
# 2: BL05177___nrdI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 311/409 (76.0%)
# Similarity: 311/409 (76.0%)
# Gaps: 29/409 ( 7.1%)
# Score: 1123.5
#
#
#=======================================
BSNT_02792___ 1 GTGGTACAAATCATATTTGATTCGAAAACAGGGAATGTTCAGCGGTTTGT 50
.||.|.||.|||.||||||||||.|||||.||.||.||||||||.|||||
BL05177___nrd 1 ATGATTCAGATCGTATTTGATTCAAAAACGGGAAACGTTCAGCGCTTTGT 50
BSNT_02792___ 51 GAATAAAACAGGCTTTCAGCAGAT--ACGCAAGGT--GGAC-GAAATGGA 95
|.||||.|| |.||||..||| || |||.||.|| |.|| || |||
BL05177___nrd 51 GGATAAGAC-GCCTTTTCGCA-ATAAACGGAAAGTCAGCACAGA---GGA 95
BSNT_02792___ 96 CCACGTGGACACTCCGTTTGTTTTGGTCACCTACACGACAAACTTCGGCC 145
..|..|.|||...||||||||||||.||||.|||||||||...||.||..
BL05177___nrd 96 GTATCTAGACGAACCGTTTGTTTTGATCACGTACACGACAGGGTTTGGGG 145
BSNT_02792___ 146 AGGTACCGGCATCAACAC-AATCA----TTTCTCGAAAAATACGCCCATC 190
|.||.||| ||.|| |.|.| |||||.||.|||.|||||||||
BL05177___nrd 146 AAGTTCCG-----AAAACGACTGAGATGTTTCTTGAGAAAAACGCCCATC 190
BSNT_02792___ 191 -TCTTATTAGGAGTCGCTGCGAGCGGCAACAAAGTATGGGGCGATAACTT 239
|||| ||.|||||.||.||.|||||.||||.|||.|||||.||.||.||
BL05177___nrd 191 TTCTT-TTGGGAGTTGCGGCAAGCGGAAACAGAGTGTGGGGAGACAATTT 239
BSNT_02792___ 240 TGCAAAAAGCGCCGATACCATTTC-AAGACAATATCAGGTGCCGA-TCTT 287
|||.||||||||.||.|..||.|| ||| ||.||||||||.|||| |||.
BL05177___nrd 240 TGCGAAAAGCGCAGAAAAAATCTCGAAG-CAGTATCAGGTTCCGATTCTC 288
BSNT_02792___ 288 GCACAAATTTGAACTCAGCGGCACATCTAAAGACGTTGAATTGTTTACTC 337
| .|||||||||.||||||||.||..|.||||||||||||.|||||||||
BL05177___nrd 289 G-GCAAATTTGAGCTCAGCGGGACGGCCAAAGACGTTGAACTGTTTACTC 337
BSNT_02792___ 338 AGGAGGTAGAAAGAGTTGTCACAAAATCAAGTGCCAAAATGGATCCAGTT 387
||||||||||||||||||||||||||||||||||||||||||||||||||
BL05177___nrd 338 AGGAGGTAGAAAGAGTTGTCACAAAATCAAGTGCCAAAATGGATCCAGTT 387
BSNT_02792___ 388 AAATAA--- 393
|||.||
BL05177___nrd 388 AAACAATGA 396
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