Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02785 and BL05171

See Amino acid alignment / Visit BSNT_02785 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence dna-align/BSNT_02785.1.5803.seq
#    -bsequence dna-align/BL05171___ebrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02785-BL05171___ebrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02785-BL05171___ebrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02785
# 2: BL05171___ebrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 331
# Identity:     181/331 (54.7%)
# Similarity:   181/331 (54.7%)
# Gaps:          86/331 (26.0%)
# Score: 550.5
# 
#
#=======================================

BSNT_02785         0 --------------------------------------------------      0
                                                                       
BL05171___ebr      1 ATGATTGCAGGCTACATTTTTCTTCTGATCGCCATCTTGTCAGAAGCGGC     50

BSNT_02785         1 ----------ATGCTGAAAGTATCTGATGGCTTCAAAAAG-----TGGAA     35
                               |||||||||.|||||||.||.|||     |     |||.|
BL05171___ebr     51 GGCAGCCGCCATGCTGAAAATATCTGACGGGTTC-----GCGCGCTGGCA     95

BSNT_02785        36 GCCAAGT--GCTTTGGTCGTCATTGGCTATTCCCTCGCCTTTTATATGCT     83
                     |||  ||  |.|.|.||.||.||.|||||....|||||.|||||.|||.|
BL05171___ebr     96 GCC--GTCGGTTCTTGTAGTAATCGGCTACGGTCTCGCATTTTACATGAT    143

BSNT_02785        84 GTCCCTGACTTTAAACCATATTCCCCTCAGCCTCTCCTATGCGACTTGGA    133
                     |||.||.||.||..|....|||||..|.||||||||||||||||||||||
BL05171___ebr    144 GTCGCTCACATTGCAGGTCATTCCATTAAGCCTCTCCTATGCGACTTGGA    193

BSNT_02785       134 GCGGGGCGGGCACAGTGCTGACGACAGTGATCGGAGTAAAATGG-TTCAA    182
                     ||||.||||||||.||.|||||..||.|.|||||.||....||| |||||
BL05171___ebr    194 GCGGAGCGGGCACCGTTCTGACTGCAATCATCGGCGTCTTGTGGTTTCAA    243

BSNT_02785       183 GGAAGATCTGAA--TGCCAAAGGGCTTAT---CGGGATTCTTTTATTACT    227
                      |||.|.|||||  .||.|||     |||   |||.|||.|.|...|..|
BL05171___ebr    244 -GAAAAGCTGAACCGGCGAAA-----TATCGCCGGCATTATCTGTCTCGT    287

BSNT_02785       228 ATCAGGGGTCGTGTTACTTAATTGGCCGTAA    258
                     .|||||.||.||..|..|.||||.|.|.|||
BL05171___ebr    288 GTCAGGCGTTGTACTGATCAATTTGTCATAA    318


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