Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02739 and BL05163
See
Amino acid alignment /
Visit
BSNT_02739 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02739___cinA.1.5803.seq
# -bsequence dna-align/BL05163___cinA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02739___cinA-BL05163___cinA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02739___cinA-BL05163___cinA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02739___cinA
# 2: BL05163___cinA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1292
# Identity: 922/1292 (71.4%)
# Similarity: 922/1292 (71.4%)
# Gaps: 82/1292 ( 6.3%)
# Score: 3122.5
#
#
#=======================================
BSNT_02739___ 1 ATGGAATTTCCAAA-AAAAGCAGAAATAATTGCAGTCGGTTCAGAGCTGC 49
|| |||.||..||| ||||||.|||||.||.||.|||||.||.|||||.|
BL05163___cin 1 AT-GAAGTTGGAAAGAAAAGCGGAAATTATCGCTGTCGGCTCTGAGCTTC 49
BSNT_02739___ 50 TGCTTGGCCAAATCGCCAATACAAATGCTCAATTTATCAGCAAACAGCTC 99
||||.||.|||||||..||||||||||||||.||||||||||..||..|.
BL05163___cin 50 TGCTCGGACAAATCGTTAATACAAATGCTCAGTTTATCAGCAGGCATTTG 99
BSNT_02739___ 100 GCTGAAATCGGGGTCAACGTATTTTATCATACAGCGGTCGGAGATAACCC 149
||.||||||||..|.|||||.||||||||.||.|||||.|||||.||.||
BL05163___cin 100 GCCGAAATCGGCATTAACGTCTTTTATCACACGGCGGTGGGAGACAATCC 149
BSNT_02739___ 150 GGAGCGGCTGAAGCAGGTCATCCGCATTGCTGAAG-AACGCTCTGACTTC 198
||||||.||.||.||.|||||.|..|..|| |.|| ||.|.|||||||||
BL05163___cin 150 GGAGCGCCTTAAACAAGTCATTCAGACAGC-GCAGCAAAGGTCTGACTTC 198
BSNT_02739___ 199 ATTATTTTTTCAGGAGGGCTTGGACCCACAAAAGATGATCTGACGAAAGA 248
||.||||||||.|||||.||.|||||.||.|||||.||||||||.|||||
BL05163___cin 199 ATCATTTTTTCGGGAGGCCTCGGACCGACGAAAGACGATCTGACAAAAGA 248
BSNT_02739___ 249 AACGATTGC--AAATACGCTG--GGACGTCCGCTTGTGTTAAATGATGAG 294
||||||.|| || |.|| ||.||.||.|||..|.|..|.|||||.
BL05163___cin 249 AACGATCGCCGAA----GTTGTCGGGCGCCCTCTTAAGCTCGACGATGAA 294
BSNT_02739___ 295 GCATTCCAATCCATTGAGGACTATTTCAAACGAACAAAACGCAC-----G 339
||.|||.||||.|||.||||.||.|||||| ||||||.|| |
BL05163___cin 295 GCCTTCGAATCGATTCAGGATTACTTCAAA-----AAAACGAACCGGGAG 339
BSNT_02739___ 340 ATGTCACCTAATAACCGAAAACAGGCGCTTGTGATCGAAGGCTCTGACGT 389
|||||.||.||.|||||.|||||||||||..|..|||||||.||.||.||
BL05163___cin 340 ATGTCGCCGAACAACCGCAAACAGGCGCTGATCCTCGAAGGATCCGATGT 389
BSNT_02739___ 390 GCTGGCGAATCACTTTGGAATGGCCCCGGGAATGCTCACAGAGCATGAAT 439
.|||.||||.|.||||||.|||||.|||||||||||....||||||||||
BL05163___cin 390 TCTGCCGAACCGCTTTGGGATGGCTCCGGGAATGCTGCTTGAGCATGAAT 439
BSNT_02739___ 440 CGCGCTATTATATGCTTCTTCCTGGACCGCCGAGCGAATTGCGTCCAATG 489
||||||.||||||||||||.||.|||||.||||..||..||...||.|||
BL05163___cin 440 CGCGCTTTTATATGCTTCTGCCGGGACCTCCGAAAGAGCTGGAGCCGATG 489
BSNT_02739___ 490 TTTGAAAACGAGGCAAAGCCTCTTCTGCTGAAAAAGATGGGTTCAAATGA 539
|||||||||||.||.|||||.||..|..||.|||||.|.||.||.|..||
BL05163___cin 490 TTTGAAAACGAAGCGAAGCCGCTGATTTTGGAAAAGCTCGGCTCGAGGGA 539
BSNT_02739___ 540 AAAAATTGTGTCAACCGTTCTTCGCTTTTTCGGTATCGGTGAATCTCAGC 589
|||.||.|||||||..||.||.|||||.|||||.|||||||||||.||||
BL05163___cin 540 AAAGATCGTGTCAAGGGTGCTGCGCTTCTTCGGCATCGGTGAATCCCAGC 589
BSNT_02739___ 590 TTGAAGCCGATTTGGAAGATATTATTGATGCGCAAACCAATCCGACAATT 639
|||||.||||||||||||||.|.||.||||||||.||.|||||||||||.
BL05163___cin 590 TTGAAACCGATTTGGAAGATCTCATCGATGCGCAGACTAATCCGACAATC 639
BSNT_02739___ 640 GCGCCTTTGGCGGCTGATGGAGAGGTGACGCTGCGTCTGACAGCCAAACA 689
||.||..|.|||||.||.||.||.||.|||||..|.||.||.||.||.||
BL05163___cin 640 GCTCCGCTTGCGGCAGACGGGGAAGTCACGCTCAGGCTTACGGCAAAGCA 689
BSNT_02739___ 690 CGCCGATGAAAAGGAAACAGAGCGTCTGTTAAAAGAAACAG-AGGCCGTT 738
.||.|||....||||.|||.|.||..|||||||||||||.| ||.||| .
BL05163___cin 690 TGCGGATCCGGAGGAGACAAACCGCTTGTTAAAAGAAACGGAAGACCG-C 738
BSNT_02739___ 739 ATCTTAGAGCGTGTCGGTGAATTTTTCTATGGTTACGATGATACTTCTCT 788
||.||.|||||.|||||.|||||.||.||.||.||.||||||||.||.||
BL05163___cin 739 ATTTTGGAGCGGGTCGGAGAATTCTTTTACGGGTATGATGATACATCCCT 788
BSNT_02739___ 789 TGTAAAAGAGCTATCTATAGCGTGCAAGGA-AAAAGGCATTACAATTTCT 837
.|.|.|||||||..|.|.|||.||| .||| .||.||.||.||..|..||
BL05163___cin 789 CGCAGAAGAGCTTGCGAAAGCATGC-CGGAGCAAGGGTATGACTCTGGCT 837
BSNT_02739___ 838 GCGGCAGAAAGCTTTACCGGAGGGCTGTTTTCTGAATGGCTGACGGATCA 887
||.||.|||||||||||.||.|||||.|||||....||||||||||| .|
BL05163___cin 838 GCTGCGGAAAGCTTTACAGGCGGGCTTTTTTCCAGCTGGCTGACGGA-AA 886
BSNT_02739___ 888 T-AGCGGTGCCTCAAAATTATTTGCC---GGGGGCGTTGTTTGCTATACA 933
| |||||.||.||..|| ||||| | ||.||||..||.|||||.|||
BL05163___cin 887 TGAGCGGCGCTTCCGAA-TATTT--CAAAGGCGGCGCCGTCTGCTACACA 933
BSNT_02739___ 934 AACGACGTGAAGCAGAATGT-----GCTTG-GTGTCAAGAAGGAAACATT 977
|||||..|||| |.||| ||..| ||.|| |.|.||.||..|
BL05163___cin 934 AACGAATTGAA----AGTGTCAGCGGCCGGCGTTTC--GGAAGACACGCT 977
BSNT_02739___ 978 AGATCGTTTTGGGGCGGTCAGCAAGGAGTGCGCATCCGAACTGGC----- 1022
..|.||.|.|||.|||||||||..|.|.|||||....||.||.||
BL05163___cin 978 GCAGCGCTATGGTGCGGTCAGCGCGCAATGCGCTAAAGAGCTCGCCGCAG 1027
BSNT_02739___ 1023 ---TAAGGGTGTTCAAAAACTCACTGGCAGCGATATCGGCATCAGCTTTA 1069
|.||.| |||| .||.||.||||||||||||||||||||.|
BL05163___cin 1028 GCATCAGAG---TCAA-----GACAGGAAGCGATATCGGCATCAGCTTCA 1069
BSNT_02739___ 1070 CTGGTGTAGCAGGACCTGATGCTCAAGAAGGGCATGAGCCTGGGCATGTG 1119
||||.|||||.||.||..||.|.||||||||.|||..|.||||..|.|||
BL05163___cin 1070 CTGGAGTAGCCGGGCCGAATACGCAAGAAGGCCATCCGGCTGGAAAGGTG 1119
BSNT_02739___ 1120 TTTATCGGCATTTCCGCAAATGG-------TAAAGAAGAGGTTCACGAGT 1162
|||||||||||.||||..|| || |.|.||||.|.| |||.|
BL05163___cin 1120 TTTATCGGCATCTCCGTGAA-GGACCAGGCTGAGGAAGCGTT---CGAAT 1165
BSNT_02739___ 1163 TTCACTTTGCGGGCTCCAGAACGGGGATCAGAAAACGCGGCGCTAAATAC 1212
||||.||.||.||.|||||..|.|.|.|..|.||.||....||.||||||
BL05163___cin 1166 TTCAGTTCGCCGGATCCAGGTCTGCGGTGCGGAAGCGTTCTGCCAAATAC 1215
BSNT_02739___ 1213 GGCTGCCATTTAAT-CTTAAA--GCTTTTAGAGCAAAAATAA 1251
|||||||||.|..| ||.||| |.| |.||||||||
BL05163___cin 1216 GGCTGCCATCTGTTGCTGAAAATGAT------GGAAAAATAA 1251
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.