Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02500 and BL05156
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02500___ylbO.1.5803.seq
# -bsequence dna-align/BL05156___ylbO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02500___ylbO-BL05156___ylbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02500___ylbO-BL05156___ylbO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: BL05156___ylbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 631
# Identity: 419/631 (66.4%)
# Similarity: 419/631 (66.4%)
# Gaps: 80/631 (12.7%)
# Score: 1326.5
#
#
#=======================================
BSNT_02500___ 1 TTGACCATTACAAGACAAGATGCTTGGACTCAGGATGAGGATTTGCTGCT 50
|||||.|||||||||||.|||||.|||||.||||||||.|||.|..||||
BL05156___ylb 1 TTGACGATTACAAGACAGGATGCATGGACACAGGATGAAGATATATTGCT 50
BSNT_02500___ 51 GGCAGAAGTGGTGCTTCGTCATATTCGAGAGGGAGGAACACAGCTTTCAG 100
|||.||.||.||..|..|.||.|||||.||.||.||.|||||||||||||
BL05156___ylb 51 GGCTGAGGTCGTATTAAGGCACATTCGGGAAGGCGGGACACAGCTTTCAG 100
BSNT_02500___ 101 CCTTTGAGGAGGTTGGGAGGGCGCTGACCAGAACCGCGGCAGCCTGTGGT 150
|||||||.||.||.||.|.|||..|.|.||||||||||||.|||||.||.
BL05156___ylb 101 CCTTTGAAGAAGTGGGCAAGGCTTTAAGCAGAACCGCGGCCGCCTGCGGA 150
BSNT_02500___ 151 TTCAGGTGGAACTCGTATGTGAGAAAACAATACCAGTCAGGTATAGAGCT 200
|||.|.|||||.||.|.|||.|||||.||||||||.|||||.||.||.||
BL05156___ylb 151 TTCCGCTGGAATTCATTTGTCAGAAAGCAATACCAATCAGGCATTGAACT 200
BSNT_02500___ 201 TGCAAAAAAGCAAAGGAAAGAACTGAGAAAGCAAATCGGCGTTCATTCGG 250
.|||||.|||||..|.|||||.|||.|.||..||||||||.|.|||||.|
BL05156___ylb 201 GGCAAAGAAGCAGCGCAAAGAGCTGCGCAAAAAAATCGGCATCCATTCCG 250
BSNT_02500___ 251 TCAATATGCCGAATTCCATGAAGC-----AGACTGCCTC----AGCATCG 291
..|| || |||| ||.|.| |.||.|..|| ||||
BL05156___ylb 251 CAAA----CC---TTCC-TGGATCTGTCAAAACGGTTTCTGAGAGCA--- 289
BSNT_02500___ 292 TCAGAAGGAAAACGAGATTTGTCCATTC-AGGATGTCATTCAATTTCTCG 340
||..|||||||..|| |..|| |.||||||||..|.|...|.|
BL05156___ylb 290 --AGGCGGAAAACCTGA------CGCTCGATGATGTCATAGAGTACTTGG 331
BSNT_02500___ 341 AACAATTCAAAGAAGCACCGTCTGCACAAGAATTTCAGCTTGA----AAG 386
||.|..|.||||||||.||| .|.||.|||.|.||.| |.|| ||
BL05156___ylb 332 AAAAGCTGAAAGAAGCCCCG-GTTCAAAAGGACTTTA--TCGACGAGAA- 377
BSNT_02500___ 387 GGAAAAA--TTGAAGGAGCAAATCCAAT-CGCTGCAAAAAGAGCTTGAGG 433
|||||| |||..|.|| |||| |||| .||||.||.||||..||||..
BL05156___ylb 378 -GAAAAAGCTTGCTGAAG-AAAT-CAATGAGCTGAAACAAGAAGTTGAAA 424
BSNT_02500___ 434 ATTTGCGGAGTGAAAATCAGACATTGCGG---AATCAGCTAGAGATGACA 480
|..||||.||.|||||||| ||.||.| ||..||||.||..|||||
BL05156___ylb 425 AGCTGCGAAGCGAAAATCA---ATCGCTGAAAAAAAAGCTTGAATTGACA 471
BSNT_02500___ 481 GAAGAGGATTACAAGGCACTGATCGATATCATGGATCGGGCCAGAAAAAT 530
|||||||||||.||.||.|||||.||.||||||||..|.|||||||||||
BL05156___ylb 472 GAAGAGGATTATAAAGCGCTGATTGAAATCATGGAGAGAGCCAGAAAAAT 521
BSNT_02500___ 531 GGTTGT--TTCGAAGGAAGACGGAAGAATGAAAAAAACG--GCTCAAG-- 574
|||.|| ||| |||.|||||.|.|||..|||||..|| ||||.||
BL05156___ylb 522 GGTCGTTCTTC--AGGGAGACGAACGAAACAAAAAGGCGATGCTCCAGCC 569
BSNT_02500___ 575 ------AAACGTAA----------------- 582
.||.|.||
BL05156___ylb 570 GGAGCCGAATGAAAATCTGGGGGAAGCTTGA 600
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