Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02500 and BL05156

See Amino acid alignment / Visit BSNT_02500 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:05
# Commandline: needle
#    -asequence dna-align/BSNT_02500___ylbO.1.5803.seq
#    -bsequence dna-align/BL05156___ylbO.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02500___ylbO-BL05156___ylbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02500___ylbO-BL05156___ylbO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02500___ylbO
# 2: BL05156___ylbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 631
# Identity:     419/631 (66.4%)
# Similarity:   419/631 (66.4%)
# Gaps:          80/631 (12.7%)
# Score: 1326.5
# 
#
#=======================================

BSNT_02500___      1 TTGACCATTACAAGACAAGATGCTTGGACTCAGGATGAGGATTTGCTGCT     50
                     |||||.|||||||||||.|||||.|||||.||||||||.|||.|..||||
BL05156___ylb      1 TTGACGATTACAAGACAGGATGCATGGACACAGGATGAAGATATATTGCT     50

BSNT_02500___     51 GGCAGAAGTGGTGCTTCGTCATATTCGAGAGGGAGGAACACAGCTTTCAG    100
                     |||.||.||.||..|..|.||.|||||.||.||.||.|||||||||||||
BL05156___ylb     51 GGCTGAGGTCGTATTAAGGCACATTCGGGAAGGCGGGACACAGCTTTCAG    100

BSNT_02500___    101 CCTTTGAGGAGGTTGGGAGGGCGCTGACCAGAACCGCGGCAGCCTGTGGT    150
                     |||||||.||.||.||.|.|||..|.|.||||||||||||.|||||.||.
BL05156___ylb    101 CCTTTGAAGAAGTGGGCAAGGCTTTAAGCAGAACCGCGGCCGCCTGCGGA    150

BSNT_02500___    151 TTCAGGTGGAACTCGTATGTGAGAAAACAATACCAGTCAGGTATAGAGCT    200
                     |||.|.|||||.||.|.|||.|||||.||||||||.|||||.||.||.||
BL05156___ylb    151 TTCCGCTGGAATTCATTTGTCAGAAAGCAATACCAATCAGGCATTGAACT    200

BSNT_02500___    201 TGCAAAAAAGCAAAGGAAAGAACTGAGAAAGCAAATCGGCGTTCATTCGG    250
                     .|||||.|||||..|.|||||.|||.|.||..||||||||.|.|||||.|
BL05156___ylb    201 GGCAAAGAAGCAGCGCAAAGAGCTGCGCAAAAAAATCGGCATCCATTCCG    250

BSNT_02500___    251 TCAATATGCCGAATTCCATGAAGC-----AGACTGCCTC----AGCATCG    291
                     ..||    ||   |||| ||.|.|     |.||.|..||    ||||   
BL05156___ylb    251 CAAA----CC---TTCC-TGGATCTGTCAAAACGGTTTCTGAGAGCA---    289

BSNT_02500___    292 TCAGAAGGAAAACGAGATTTGTCCATTC-AGGATGTCATTCAATTTCTCG    340
                       ||..|||||||..||      |..|| |.||||||||..|.|...|.|
BL05156___ylb    290 --AGGCGGAAAACCTGA------CGCTCGATGATGTCATAGAGTACTTGG    331

BSNT_02500___    341 AACAATTCAAAGAAGCACCGTCTGCACAAGAATTTCAGCTTGA----AAG    386
                     ||.|..|.||||||||.||| .|.||.|||.|.||.|  |.||    || 
BL05156___ylb    332 AAAAGCTGAAAGAAGCCCCG-GTTCAAAAGGACTTTA--TCGACGAGAA-    377

BSNT_02500___    387 GGAAAAA--TTGAAGGAGCAAATCCAAT-CGCTGCAAAAAGAGCTTGAGG    433
                      ||||||  |||..|.|| |||| |||| .||||.||.||||..||||..
BL05156___ylb    378 -GAAAAAGCTTGCTGAAG-AAAT-CAATGAGCTGAAACAAGAAGTTGAAA    424

BSNT_02500___    434 ATTTGCGGAGTGAAAATCAGACATTGCGG---AATCAGCTAGAGATGACA    480
                     |..||||.||.||||||||   ||.||.|   ||..||||.||..|||||
BL05156___ylb    425 AGCTGCGAAGCGAAAATCA---ATCGCTGAAAAAAAAGCTTGAATTGACA    471

BSNT_02500___    481 GAAGAGGATTACAAGGCACTGATCGATATCATGGATCGGGCCAGAAAAAT    530
                     |||||||||||.||.||.|||||.||.||||||||..|.|||||||||||
BL05156___ylb    472 GAAGAGGATTATAAAGCGCTGATTGAAATCATGGAGAGAGCCAGAAAAAT    521

BSNT_02500___    531 GGTTGT--TTCGAAGGAAGACGGAAGAATGAAAAAAACG--GCTCAAG--    574
                     |||.||  |||  |||.|||||.|.|||..|||||..||  ||||.||  
BL05156___ylb    522 GGTCGTTCTTC--AGGGAGACGAACGAAACAAAAAGGCGATGCTCCAGCC    569

BSNT_02500___    575 ------AAACGTAA-----------------    582
                           .||.|.||                 
BL05156___ylb    570 GGAGCCGAATGAAAATCTGGGGGAAGCTTGA    600


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