Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02461 and BL05153
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_02461___ylaI.1.5803.seq
# -bsequence dna-align/BL05153___ylaI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02461___ylaI-BL05153___ylaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02461___ylaI-BL05153___ylaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02461___ylaI
# 2: BL05153___ylaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 153/218 (70.2%)
# Similarity: 153/218 (70.2%)
# Gaps: 19/218 ( 8.7%)
# Score: 506.5
#
#
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BSNT_02461___ 1 ATGATGAGGGTCAAATGTTCTATT-TGCGATAAAATTGAAACAATTGATG 49
.|||||||.||.||||| ||| ||.||.|||||.||||.|||.||||
BL05153___yla 1 ---GTGAGGGTAAAGTGTTC-ATTGTGTGACAAAATCGAAAAAATCGATG 46
BSNT_02461___ 50 ATGATACCCTGATCGCGAAACGGCTTCGAAACCGCCCGATCCATACATAT 99
|.||.||.||.||.||.|||||.||.||||||||.|||||.|||||.|||
BL05153___yla 47 ACGACACACTCATTGCCAAACGTCTCCGAAACCGGCCGATACATACCTAT 96
BSNT_02461___ 100 ATGTGCCAGGAATGCCACGATCGGATTGCCAAA---AAAACAGAGGAACG 146
||||||||.||||||..|||..|.||| ||| |||||.||..|.||
BL05153___yla 97 ATGTGCCATGAATGCAGCGAAAGAATT---AAAATCAAAACCGAAAACCG 143
BSNT_02461___ 147 GCTGAAAACGGGAAAATTTACTTTTCACCCGGGACAGCAGAAAAAAGAAA 196
|.|||||||.||....||||..||..|.||| || |||||||.|.|||
BL05153___yla 144 GATGAAAACCGGCCGTTTTAAGTTATATCCG---CA-CAGAAAAGATAAA 189
BSNT_02461___ 197 AAG----TCAAAAAATAA 210
.|| ||||...||||
BL05153___yla 190 GAGCAGATCAAGTCATAA 207
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