Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02461 and BL05153

See Amino acid alignment / Visit BSNT_02461 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02461___ylaI.1.5803.seq
#    -bsequence dna-align/BL05153___ylaI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02461___ylaI-BL05153___ylaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02461___ylaI-BL05153___ylaI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02461___ylaI
# 2: BL05153___ylaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity:     153/218 (70.2%)
# Similarity:   153/218 (70.2%)
# Gaps:          19/218 ( 8.7%)
# Score: 506.5
# 
#
#=======================================

BSNT_02461___      1 ATGATGAGGGTCAAATGTTCTATT-TGCGATAAAATTGAAACAATTGATG     49
                        .|||||||.||.||||| ||| ||.||.|||||.||||.|||.||||
BL05153___yla      1 ---GTGAGGGTAAAGTGTTC-ATTGTGTGACAAAATCGAAAAAATCGATG     46

BSNT_02461___     50 ATGATACCCTGATCGCGAAACGGCTTCGAAACCGCCCGATCCATACATAT     99
                     |.||.||.||.||.||.|||||.||.||||||||.|||||.|||||.|||
BL05153___yla     47 ACGACACACTCATTGCCAAACGTCTCCGAAACCGGCCGATACATACCTAT     96

BSNT_02461___    100 ATGTGCCAGGAATGCCACGATCGGATTGCCAAA---AAAACAGAGGAACG    146
                     ||||||||.||||||..|||..|.|||   |||   |||||.||..|.||
BL05153___yla     97 ATGTGCCATGAATGCAGCGAAAGAATT---AAAATCAAAACCGAAAACCG    143

BSNT_02461___    147 GCTGAAAACGGGAAAATTTACTTTTCACCCGGGACAGCAGAAAAAAGAAA    196
                     |.|||||||.||....||||..||..|.|||   || |||||||.|.|||
BL05153___yla    144 GATGAAAACCGGCCGTTTTAAGTTATATCCG---CA-CAGAAAAGATAAA    189

BSNT_02461___    197 AAG----TCAAAAAATAA    210
                     .||    ||||...||||
BL05153___yla    190 GAGCAGATCAAGTCATAA    207


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