Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02373 and BL05145

See Amino acid alignment / Visit BSNT_02373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence dna-align/BSNT_02373___ykuU.1.5803.seq
#    -bsequence dna-align/BL05145___ykuU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02373___ykuU-BL05145___ykuU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02373___ykuU-BL05145___ykuU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02373___ykuU
# 2: BL05145___ykuU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     465/543 (85.6%)
# Similarity:   465/543 (85.6%)
# Gaps:           0/543 ( 0.0%)
# Score: 2013.0
# 
#
#=======================================

BSNT_02373___      1 ATGGCAGAACGTATGGTAGGTAAACAAGCTCCTCGTTTTGAAATGGAAGC     50
                     |||||||||||.|||||||||||||||||.||.||.||||||||||||||
BL05145___yku      1 ATGGCAGAACGCATGGTAGGTAAACAAGCGCCGCGCTTTGAAATGGAAGC     50

BSNT_02373___     51 AGTCCTTGCAAGCAAAGAATTCGGCAAAGTAAGTCTTGAGGAAAACATGA    100
                     .||.|||||||.||||||||||||.||||||||.|||||.||||||||||
BL05145___yku     51 GGTTCTTGCAAACAAAGAATTCGGAAAAGTAAGCCTTGAAGAAAACATGA    100

BSNT_02373___    101 AAAACGACAAATGGACAGTGCTATTCTTCTATCCAATGGATTTCACTTTT    150
                     ||||.||.||.|||||.||.||||||||||||||||||||.||||||||.
BL05145___yku    101 AAAATGATAAGTGGACGGTTCTATTCTTCTATCCAATGGACTTCACTTTC    150

BSNT_02373___    151 GTTTGTCCCACAGAAATTACAGCAATGTCTGACCGCTATGACGAGTTCGA    200
                     ||.|||||.||||||||||||||||||||||||||||||||||||||.||
BL05145___yku    151 GTGTGTCCGACAGAAATTACAGCAATGTCTGACCGCTATGACGAGTTTGA    200

BSNT_02373___    201 AGATCTTGATGCAGAAGTCATCGGGGTTTCAACTGATACCATCCATACTC    250
                     |||.||||||||||||||.|||||.||.||||||||.||||||||.||||
BL05145___yku    201 AGACCTTGATGCAGAAGTTATCGGCGTATCAACTGACACCATCCACACTC    250

BSNT_02373___    251 ATTTAGCTTGGATCAATACAGACCGCAAAGAAAACGGTCTTGGCCAGCTG    300
                     |.||.||.|||||.||.||.|||||||||||.||||||||.|||||||||
BL05145___yku    251 ACTTGGCATGGATTAACACGGACCGCAAAGATAACGGTCTCGGCCAGCTG    300

BSNT_02373___    301 AAATACCCGCTTGCTGCTGATACAAACCATGAGGTATCCCGGGAATATGG    350
                     |||||.|||||||||||.||.|||||||||||.|||||.||.|||||.||
BL05145___yku    301 AAATATCCGCTTGCTGCCGACACAAACCATGAAGTATCTCGTGAATACGG    350

BSNT_02373___    351 CGTTTTAATCGAAGAAGAAGGTGTGGCTTTGCGCGGATTGTTTATTATTA    400
                     |||..|.||.||||||||||||||.||..|.|||||||||||.||.||||
BL05145___yku    351 CGTACTGATTGAAGAAGAAGGTGTAGCGCTTCGCGGATTGTTCATCATTA    400

BSNT_02373___    401 ATCCTGAAGGGGAGCTTCAATATCAAACTGTTTTCCATAACAATATTGGG    450
                     ||||.|||||.||.||||||||||||||.||.||||||||||||||.||.
BL05145___yku    401 ATCCAGAAGGCGAACTTCAATATCAAACAGTGTTCCATAACAATATCGGC    450

BSNT_02373___    451 CGTGATGTTGATGAAACGCTTCGTGTTCTCCAGGCGCTGCAAACTGGCGG    500
                     ||||||||.||.|||||..|.||.||.||.||.|||||||||||.|||||
BL05145___yku    451 CGTGATGTAGACGAAACATTGCGCGTGCTTCAAGCGCTGCAAACAGGCGG    500

BSNT_02373___    501 ACTCTGTCCGGCTAACTGGAAACCAGGCCAAAAAACACTTTAA    543
                     .||.||.||.||.|||||||||||.||.|||..|||.||||||
BL05145___yku    501 TCTTTGCCCTGCAAACTGGAAACCGGGACAAGCAACCCTTTAA    543


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