Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01997 and BL05123
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_01997.1.5803.seq
# -bsequence dna-align/BL05123.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01997-BL05123.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01997-BL05123.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01997
# 2: BL05123
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 531
# Identity: 413/531 (77.8%)
# Similarity: 413/531 (77.8%)
# Gaps: 18/531 ( 3.4%)
# Score: 1599.0
#
#
#=======================================
BSNT_01997 1 TTGAAAAAGTGGTTCGTTTTATTCATGTCTTTAGGACTAGCACTTGCGTT 50
||||||||.|..||.||||||||..|.|||||.||.||.||.||.||.||
BL05123 1 TTGAAAAAATTTTTAGTTTTATTTTTATCTTTCGGCCTCGCTCTGGCCTT 50
BSNT_01997 51 AGCAGCATGTAGCTCTACAGATGATGTCTCTACAGG----GAGTAGTGAT 96
|||.||.||.|||||.||.|||||.||.||.||||| ||| |||
BL05123 51 AGCCGCCTGCAGCTCAACTGATGACGTATCAACAGGAACAGAG----GAT 96
BSNT_01997 97 TCAAAAGACAAAAAAACTGAAGAGACTAAAGATGACGGCTCTAAAAAAGT 146
||||||||||||||.||.|||||||..||||||||.||.|||||||||||
BL05123 97 TCAAAAGACAAAAAGACAGAAGAGAAGAAAGATGATGGTTCTAAAAAAGT 146
BSNT_01997 147 CGATGCAAG----CAAACAATCTGCTGAAGCTCTGGGAATGAAAGTTAAC 192
.|||||||| ||||..| ||||.|||.|.||.|||||||||||.
BL05123 147 TGATGCAAGTAGTCAAAAGA----CTGATGCTTTAGGGATGAAAGTTAAT 192
BSNT_01997 193 CTGGGCGATGTAAAGATCATGAAAGACAAGATAAACGTTGGTATAAACAT 242
.|.||.||.||.||.||.||||||||.||..|.|||||.|||||.|||||
BL05123 193 TTAGGAGACGTTAAAATTATGAAAGATAAAGTTAACGTCGGTATCAACAT 242
BSNT_01997 243 TGAAAATACTACTGACAAGGTCCTGACTTTCTATCCAGACCAAGGAAATG 292
||||||.||.|||..|||.|||||.|..||||||||.||.|||||.||||
BL05123 243 TGAAAACACAACTAGCAAAGTCCTCAACTTCTATCCTGATCAAGGTAATG 292
BSNT_01997 293 CAGTAATTGGCAG-CATGCAATTATCAGCAAACATGTTCTTGACTGATGG 341
|||||.|.|| || |||||||||||||||.||.|||||.|||||||||||
BL05123 293 CAGTAGTCGG-AGACATGCAATTATCAGCCAATATGTTTTTGACTGATGG 341
BSNT_01997 342 AGAAGTTGGCGGTGAAGTTCAAGGCGGCGTTAAACAAGAAGGAGTTCTTG 391
.||||||||.||.|||||||||||.|||||||||||.||.||.||.||.|
BL05123 342 CGAAGTTGGTGGAGAAGTTCAAGGTGGCGTTAAACAGGACGGGGTGCTGG 391
BSNT_01997 392 AGTTTTCAGCTCCTGATGGAAAAGAAATTGATGTTAATAGCGTTAAAGAA 441
|||||.|.|..||.||.||||||||..|||||.|.||||.|.||||||||
BL05123 392 AGTTTGCCGTACCAGAAGGAAAAGAGCTTGATATCAATAACATTAAAGAA 441
BSNT_01997 442 ATCAAATTGAACTTCGGTGATGTTACAACTGATGACTTCATGAATACTAA 491
|||||.|||||.||.||||||||.||.|||||.|||||.|||||||..||
BL05123 442 ATCAAGTTGAATTTTGGTGATGTAACCACTGAAGACTTTATGAATAACAA 491
BSNT_01997 492 AGCAGTAAGAATCAAAGTACCAGTTAAGTAA 522
|||||||..|.|||..||.||||||||||||
BL05123 492 AGCAGTATCATTCACTGTGCCAGTTAAGTAA 522
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