Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01996 and BL05122

See Amino acid alignment / Visit BSNT_01996 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence dna-align/BSNT_01996.1.5803.seq
#    -bsequence dna-align/BL05122.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01996-BL05122.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01996-BL05122.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01996
# 2: BL05122
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:     304/348 (87.4%)
# Similarity:   304/348 (87.4%)
# Gaps:           0/348 ( 0.0%)
# Score: 1344.0
# 
#
#=======================================

BSNT_01996         1 ATGAAAAGAACAACTGAATTTGTTTTAGGTCTAATTGGTGGAATTTTTGG     50
                     |||||||||||.|||||||||||||||||||||||.||.||||||||.||
BL05122            1 ATGAAAAGAACTACTGAATTTGTTTTAGGTCTAATAGGCGGAATTTTCGG     50

BSNT_01996        51 ATTTATAGGAGCCTTTTTGGCATTAATTGTTGGTGGTCTTGATGCCTCTT    100
                     .|||||.||.|||||||||||.||||||||.||.||.||.||||||||||
BL05122           51 TTTTATTGGTGCCTTTTTGGCGTTAATTGTCGGCGGACTCGATGCCTCTT    100

BSNT_01996       101 TTAACTCATCTGGCACAAGCGATATTATCGGTTTAGGTTGGGGTGCTATC    150
                     ||||.|||||||||||||||||||||||.|||||||||||||||||||||
BL05122          101 TTAATTCATCTGGCACAAGCGATATTATTGGTTTAGGTTGGGGTGCTATC    150

BSNT_01996       151 TTCCTCTCCATTCTTGGTATTGTTGCTTCTGTAATTATTAGAAAGAAAGC    200
                     ||||||||.||.|||||.|||.|.|||||.||.|||.|||||||.|||||
BL05122          151 TTCCTCTCAATCCTTGGAATTATCGCTTCGGTGATTGTTAGAAAAAAAGC    200

BSNT_01996       201 AAAATTGGGTGGAATTTTACTTCTTATATCTGGTATCGGTGGCCTGATTT    250
                     .|||||.|||||||||||.|||.||||.||||||||||||||||||||||
BL05122          201 TAAATTAGGTGGAATTTTGCTTATTATTTCTGGTATCGGTGGCCTGATTT    250

BSNT_01996       251 GTATTTCTTTATTCTACTTACTGCCTGCTGTTCTTCTCATTATCTCAGGC    300
                     |.||||..||||||||||||||.||.|||.|||||||.||||||||.||.
BL05122          251 GCATTTTCTTATTCTACTTACTTCCCGCTATTCTTCTAATTATCTCGGGA    300

BSNT_01996       301 ATAATGGGACTCGCAAGAAGAGACAAAACAACGACGACAGCAGCGTAA    348
                     .|.||||||||.||.||||||||.||||||||||||||.|||||.|||
BL05122          301 GTTATGGGACTTGCTAGAAGAGATAAAACAACGACGACGGCAGCATAA    348


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