Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02236 and BL05120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_02236___ykzD.1.5803.seq
# -bsequence dna-align/BL05120___ykzD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02236___ykzD-BL05120___ykzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02236___ykzD-BL05120___ykzD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02236___ykzD
# 2: BL05120___ykzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 163
# Identity: 98/163 (60.1%)
# Similarity: 98/163 (60.1%)
# Gaps: 32/163 (19.6%)
# Score: 253.5
#
#
#=======================================
BSNT_02236___ 1 -------------ATG--GAAAAGAAAGAGGAGCAATACATCAAT----C 31
|.| |||||.|.|||.| ||| .|||||| |
BL05120___ykz 1 GTGAAAGAACAAGAAGACGAAAAAAGAGACG---AAT-TATCAATTGAGC 46
BSNT_02236___ 32 AGGCTGAATATGTCCCTCATCCGACGAAGGAAGGAGAGTATGC-CTTATT 80
||||.||.|.|||.||.|||||.|...|.||||||||.||.|| ||| ||
BL05120___ykz 47 AGGCGGAGTTTGTGCCGCATCCAAAATATGAAGGAGAATACGCGCTT-TT 95
BSNT_02236___ 81 TCTTCATGAAACGTATCATTTGCTTTCTGAAGATGAC---GAGACACAAA 127
.||.||.||||..|||||..||||.||..|.||.||| ||| ||..||
BL05120___ykz 96 ACTGCACGAAAACTATCACCTGCTGTCAAAGGACGACCTTGAG-CAGGAA 144
BSNT_02236___ 128 CAAC--AGAATAA 138
|.| |.|||||
BL05120___ykz 145 -AGCGAAAAATAA 156
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