Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02207 and BL05119
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:43
# Commandline: needle
# -asequence dna-align/BSNT_02207___yklA.1.5803.seq
# -bsequence dna-align/BL05119___ohrA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02207___yklA-BL05119___ohrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02207___yklA-BL05119___ohrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02207___yklA
# 2: BL05119___ohrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 458
# Identity: 309/458 (67.5%)
# Similarity: 309/458 (67.5%)
# Gaps: 67/458 (14.6%)
# Score: 1014.0
#
#
#=======================================
BSNT_02207___ 1 ATGAGTCAGCCATTATTTAC------AGCAACTGTTTCAGCGGTAGGAGG 44
|||| |.||..||||||| |||.|||| .||..||| ||
BL05119___ohr 1 ATGA---AACCGCTATTTACCTCGCAAGCCACTG--CCAATGGT----GG 41
BSNT_02207___ 45 AAGAGAAGGAAAGGTCATTTCATCAGACCGCGTTCTTGAGCTTGATGTCG 94
.|||||.|||.|.||||..|||||.||||||||.||||||||.||..|.|
BL05119___ohr 42 CAGAGACGGACAAGTCACCTCATCTGACCGCGTCCTTGAGCTGGAGCTGG 91
BSNT_02207___ 95 CAATGCCGGGGACACCAAGAGCAAAGAAATTAGAAAAAGCGACAAATCCA 144
|.||||||||.||.||||.|||.|||.||...|||||.||.||.||.||.
BL05119___ohr 92 CCATGCCGGGAACGCCAAAAGCCAAGGAAAACGAAAATGCCACCAACCCG 141
BSNT_02207___ 145 GAGCAGCTGTTTGCAGCAGGTTATGCAGCTTGCTTTGACAGCGCCCTGCA 194
||||||||||||||.||.||.||.||.||.||||||||||||||..||||
BL05119___ohr 142 GAGCAGCTGTTTGCCGCCGGATACGCGGCATGCTTTGACAGCGCATTGCA 191
BSNT_02207___ 195 GCTTG-TCGCAAGAACAGAA--CGGGT-----AAAAGTAGAGACAGAGGT 236
.||| .||| .||.|| ||.|| || |.|||||||||||
BL05119___ohr 192 -ATTGACCGC----CCAAAAGGCGCGTCTTCGAA---TGGAGACAGAGGT 233
BSNT_02207___ 237 TACAGCGAATGTAAGTCTGTTAAAGGATGAAGC----GGACCAGGGCTAC 282
.||.|||||.||.||.||..|.||.|||||||| ||| |||||.
BL05119___ohr 234 GACGGCGAACGTCAGCCTTCTGAAAGATGAAGCAGATGGA----GGCTAT 279
BSNT_02207___ 283 AAGCTTGGTGTGACGCTGCAAGTAAAAGGAGAAGGAGTCAGTGCATCAGA 332
|||||..||||.||.|||||||||||||||...||.|| || |.||||
BL05119___ohr 280 AAGCTCAGTGTCACACTGCAAGTAAAAGGAACCGGCGT---TG-AACAGA 325
BSNT_02207___ 333 ATTGGAGGCGCTTGTGAAAA-----------AAGCGCACGGCGTCTGCCC 371
.||.||| .||||| ||||.||...|||.|||||
BL05119___ohr 326 -----GGGAGCT--CGAAAAACTCGTCCATCAAGCTCATACCGTTTGCCC 368
BSNT_02207___ 372 GTATTCAAAAGCAACCTCCGGAAATATTGATGTGACACTTGAAG---TTG 418
||||||||||||||..|||||||||.|||||||.|..||||||| ||.
BL05119___ohr 369 GTATTCAAAAGCAATTTCCGGAAATGTTGATGTCAACCTTGAAGTGATTT 418
BSNT_02207___ 419 CTGAATAA 426
||.||
BL05119___ohr 419 CTTAA--- 423
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