Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01979 and BL05115
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_01979___yjcH.1.5803.seq
# -bsequence dna-align/BL05115___yjcH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01979___yjcH-BL05115___yjcH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01979___yjcH-BL05115___yjcH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01979___yjcH
# 2: BL05115___yjcH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 748
# Identity: 533/748 (71.3%)
# Similarity: 533/748 (71.3%)
# Gaps: 50/748 ( 6.7%)
# Score: 1790.0
#
#
#=======================================
BSNT_01979___ 1 ATGGCACCGAAAAACGGCACAG---TGCAAGAAAAGAAATTCTTTTCAAA 47
.||||...|||||..|| || |.||.||.||.||..|.|||||..|
BL05115___yjc 1 TTGGCTATGAAAACAGG---AGTCATTCAGGAGAAAAAGCTTTTTTCGGA 47
BSNT_01979___ 48 AGAGCTTAACGAGGAAAT-GACCTTGCTTGTTTATCTGCCGTCCAACTAC 96
||||||...||||||||| ||.||| ||.||.|||.||||||||..||.|
BL05115___yjc 48 AGAGCTCGGCGAGGAAATGGAGCTT-CTCGTCTATTTGCCGTCCTCCTTC 96
BSNT_01979___ 97 TCCCCGCTTTATAAATACCATGTCATTATCGCGCAGGACGGCCACGATTA 146
||.||||||||.|||||.|||||.||.|||||.|||||.||.||.||.||
BL05115___yjc 97 TCGCCGCTTTACAAATATCATGTGATCATCGCACAGGATGGACATGACTA 146
BSNT_01979___ 147 TTTCAGGCTGGGGAGAATCGGCAGACAGGTTGAGGAATTGCTGTCGAAAC 196
||||.||||.|||.|.|||.|||||||||||||.|||.||.||.||||..
BL05115___yjc 147 TTTCCGGCTCGGGCGCATCAGCAGACAGGTTGAAGAACTGTTGGCGAACG 196
BSNT_01979___ 197 GCGAAATAGACCGGAGCATTATTATCGGTGTTCCTTATAAGGATGTAAAA 246
|.|||||.||..|.|||||.||.|||||..||||.||.||..|.|||.|.
BL05115___yjc 197 GTGAAATCGAAAGAAGCATCATCATCGGCATTCCGTACAAAAACGTACAG 246
BSNT_01979___ 247 GAGCGCAGAA-----ACACCTATCATCCGGAGGGTTCAAAATTTTCG--G 289
|| .|||| ||| ||.||||||||.||.|||||| |||| |
BL05115___yjc 247 GA---AAGAAGGCTTACA--TACCATCCGGAAGGGTCAAAA--TTCGAAG 289
BSNT_01979___ 290 CTTATAAACGGTTCATCGCCCATGAGCTCGTTCCTTTTGCAGA-TGATGA 338
|.||||||||.||..|.||..||||.|||||.|||||..|.|| .|| ||
BL05115___yjc 290 CGTATAAACGTTTTTTGGCAAATGAACTCGTCCCTTTCACCGACAGA-GA 338
BSNT_01979___ 339 GTATCCAACCTATCAGATCGGTTACGGCCGAACGCTGATCGGTGATTCGC 388
||||||.||.|||||..||||.|..|||.|.||||||||.||.|||||||
BL05115___yjc 339 GTATCCGACATATCAAGTCGGATCAGGCAGGACGCTGATAGGGGATTCGC 388
BSNT_01979___ 389 TCGGAGCAACCGTGTCACTTATGACAGCGCTTGATTATCCGAATATGTTT 438
||||||.|||.||.||.||.|||||.||||||||.||.|||||||||||.
BL05115___yjc 389 TCGGAGGAACGGTTTCTCTCATGACGGCGCTTGACTACCCGAATATGTTC 438
BSNT_01979___ 439 GGCAACATCATCATGCAGTCTCCCTATGTTGACAAACACGTACTAGAAGC 488
||.|||.||||.||||||||.||.|||||.|||...||.||.||.||...
BL05115___yjc 439 GGGAACGTCATTATGCAGTCACCTTATGTAGACCGCCATGTTCTCGATAA 488
BSNT_01979___ 489 CGTAAAACAGTCAGACGATATCAAACACCT----CTCTATTT--AT---- 528
.||.|||||||| |||| || ||| || ||||| ||
BL05115___yjc 489 AGTGAAACAGTC---CGAT-TC-----CCTGCAGCT-TATTTCAATTTGC 528
BSNT_01979___ 529 CACCAAATCGGAACAAAAGAAACTGACGTCCACACGACAGACGGGAACAT 578
|||||||||||....||.|||||.|.||||.|.|||||.||.|...|.||
BL05115___yjc 529 CACCAAATCGGCGAGAAGGAAACCGCCGTCAAAACGACCGATGATCAAAT 578
BSNT_01979___ 579 TCTGGACTTTACAGAACCGAACCGGGAGC---TGAAACAGCTGCTGGAGA 625
|.||||.||.||||..||.|| .|||| |.|||.||.||||.||..
BL05115___yjc 579 TTTGGATTTCACAGGTCCAAA---TGAGCAATTAAAAGAGTTGCTTGAAT 625
BSNT_01979___ 626 AAAAGCTTTCCGATTATGATTTCGAGCCATTTGACGGAGACCACAAATGG 675
.|||||...|..|.||.||||||.|..|.||||||||.||.|||||||||
BL05115___yjc 626 CAAAGCAGACAAACTACGATTTCAAAGCTTTTGACGGGGATCACAAATGG 675
BSNT_01979___ 676 ACATACTGGCAGCCGCTCATCACCCCGGCGCTGAAAAAAATGCTTTAA 723
||.|||||||||||||||||||||||.||..|.|||||||||||.||.
BL05115___yjc 676 ACGTACTGGCAGCCGCTCATCACCCCCGCTTTAAAAAAAATGCTGTAG 723
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