Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01940 and BL05110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01940___yjbL.1.5803.seq
# -bsequence dna-align/BL05110___yjbL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01940___yjbL-BL05110___yjbL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01940___yjbL-BL05110___yjbL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01940___yjbL
# 2: BL05110___yjbL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 404
# Identity: 253/404 (62.6%)
# Similarity: 253/404 (62.6%)
# Gaps: 73/404 (18.1%)
# Score: 755.0
#
#
#=======================================
BSNT_01940___ 1 ATGCAAAACAGAATCGAAATT-TTGAA-------TGCAACATTATCGGAT 42
|||||.||||||||.||.||| ..||| |||.|.|..|.|||.|
BL05110___yjb 1 ATGCAGAACAGAATTGAGATTACAGAAGCCAATCTGCGAAACGACCGGCT 50
BSNT_01940___ 43 GATCAGCTTCGCCTTACTTGTCAGACAG---AAGGAA--ACGAAGCGGAA 87
|.| .|||.| ||| ||..|| |||.||||||.
BL05110___yjb 51 GGT-------------GTTGAC---CAGCGAAATCAATGACGGAGCGGAG 84
BSNT_01940___ 88 CGCAAGCCGTCAGGTCAAATGCTTGTTGATTCTGACCACTTTGCTTTTGT 137
||.||||||.|.||.|..|||||....||.||.||.||.|||||.|||||
BL05110___yjb 85 CGGAAGCCGGCCGGACGCATGCTGACAGACTCCGATCATTTTGCATTTGT 134
BSNT_01940___ 138 ATACATACTTGAATTAGCTGATTCTTTTGAATATGTCATTATAAAGGAA- 186
|||||||||||||...|..||.||.||||||||.||||||.||||.|||
BL05110___yjb 135 ATACATACTTGAACAGGACGAATCCTTTGAATACGTCATTTTAAACGAAG 184
BSNT_01940___ 187 -CATGTATGGCCGGAAC-TGAAGCAGGCCCATGCACAAAAAATACCGGT- 233
|| |.|||.|.||.| |.|||| |||||.|| |..|||||
BL05110___yjb 185 GCA--TCTGGTCCGATCTTAAAGC-GGCCCTTG--------ACGCCGGTC 223
BSNT_01940___ 234 ------TGTTT-----TAGAGGCAGGAGACCAAACAATTGAACTGGCA-- 270
||||| ||..|| |||| |..||.|||| |
BL05110___yjb 224 TTCCTGTGTTTTTACATATCGG---------AAAC-ACGGAGCTGG-AGC 262
BSNT_01940___ 271 -----GGCCTGCATGAGGAGCTGGAATATCTTTTAGAAAATATAAAAGAT 315
||..|.|||||.|||||.|.||||.|..||||.|||||.||||||
BL05110___yjb 263 TTAACGGGTTCCATGATGAGCTCGGATATTTAATAGAGAATATTAAAGAT 312
BSNT_01940___ 316 AATGCAAACTATGGAGAAGAAATGGAAGAAAAAGTGAAACACGTGTTTTT 365
||||||||.|||||.||||||||||||||.|.||||||||...|.||..|
BL05110___yjb 313 AATGCAAATTATGGCGAAGAAATGGAAGAGAGAGTGAAACGGATATTCCT 362
BSNT_01940___ 366 ATAG 369
.|||
BL05110___yjb 363 CTAG 366
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