Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01866 and BL05104

See Amino acid alignment / Visit BSNT_01866 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_01866___yitT.1.5803.seq
#    -bsequence dna-align/BL05104___yitT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01866___yitT-BL05104___yitT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01866___yitT-BL05104___yitT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: BL05104___yitT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 847
# Identity:     659/847 (77.8%)
# Similarity:   659/847 (77.8%)
# Gaps:           8/847 ( 0.9%)
# Score: 2533.0
# 
#
#=======================================

BSNT_01866___      1 ATGGTACTAGATCAAACAAAAAAATTACTCATCGTCATCATCGGCGCTTT     50
                     |||||..|||...||.||||||||||..||||.||||||||||||||.||
BL05104___yit      1 ATGGTCATAGCGGAAGCAAAAAAATTGTTCATTGTCATCATCGGCGCCTT     50

BSNT_01866___     51 ACTCAATGCTGCCGGGCTGAACTTATTTTTGATACCTGCAGATGTATATG    100
                     ..|.|||||...|||..||||..|.|||.||||.||.||.|||||.||.|
BL05104___yit     51 GTTAAATGCCATCGGATTGAATCTGTTTCTGATTCCCGCCGATGTTTACG    100

BSNT_01866___    101 CCAGCGGATTTACAGGTGTTGCCCAGCTTTTATCAAGCGTCG-TTGATCA    149
                     |||||||.|||||.||.||.||.|||||||||||.|||| || ||||.||
BL05104___yit    101 CCAGCGGCTTTACGGGGGTGGCGCAGCTTTTATCGAGCG-CGCTTGACCA    149

BSNT_01866___    150 ATATGCCCCCTTTTACATATCGACGGGAACGCTCTTGTTCCTCTTAAACA    199
                     .||...|||..||||..|.||.|||||.|||||.|||||..|.|||||||
BL05104___yit    150 GTACAGCCCGATTTATTTTTCAACGGGGACGCTATTGTTTATTTTAAACA    199

BSNT_01866___    200 TTCCGGTCGGTATTTTAGGATGGCTGAAGGTCGGCAAATCGTTTACAGTG    249
                     ||||.|||||.|||.||||.|||||.||||||||....||.|||||.||.
BL05104___yit    200 TTCCCGTCGGGATTCTAGGGTGGCTCAAGGTCGGGCGCTCATTTACGGTC    249

BSNT_01866___    250 TACAGCATTTTAAGTGTCGCACTCACTACTCTGTTTATGGGGATCCTGCC    299
                     |||||||||||.||.||.||..|.||.||..|.|||.|||||||.||.||
BL05104___yit    250 TACAGCATTTTGAGCGTGGCCTTGACGACGGTCTTTTTGGGGATGCTCCC    299

BSNT_01866___    300 GGAAACAAGCCTGTCACATGACATTTTGCTGAACGCGGTGTTCGGCGGCG    349
                     .||..|.|||||||||.|.||||||||||||||.||.|||||||||||.|
BL05104___yit    300 TGAGGCGAGCCTGTCAAACGACATTTTGCTGAATGCCGTGTTCGGCGGGG    349

BSNT_01866___    350 TCATTTCCGCAGTCGGTATCGGCTTAACATTAAAATACGGAGCTTCGACA    399
                     |.||..||||.|||||.||||||.|.||..|.||||||||.|||||.||.
BL05104___yit    350 TGATCGCCGCGGTCGGGATCGGCCTGACCCTTAAATACGGGGCTTCAACG    399

BSNT_01866___    400 GGCGGGCTTGATATCGTCGCCATGGTGCTTGCAAAGTGGAAGGATAAACC    449
                     |||||..|.|||||..|.||.|||.|.||.|||||||||||.||.|||||
BL05104___yit    400 GGCGGTTTGGATATTATTGCGATGATCCTGGCAAAGTGGAAAGACAAACC    449

BSNT_01866___    450 CGTCGGCACGTATTTCTTCATTCTGAACGG---GATTATCATCTTGACGG    496
                     .||||||||.||||||||.|||.|.|||||   ||||   ||.||.||.|
BL05104___yit    450 GGTCGGCACCTATTTCTTTATTTTAAACGGTGCGATT---ATTTTAACAG    496

BSNT_01866___    497 CAGGATTATTGCAAGGTTGGGAGAAAGCATTATATACCCTGGTTACACTA    546
                     |||||||||||.|.||.||||||||||||||||||||.||.|||||||||
BL05104___yit    497 CAGGATTATTGAACGGATGGGAGAAAGCATTATATACGCTCGTTACACTA    546

BSNT_01866___    547 TATGTGACAACGAGGGTGATCGACGCAATTCACACTCGCCACATGAAGCT    596
                     |||||||||||.||||||||.||.||.||.|||||.||||||...|||||
BL05104___yit    547 TATGTGACAACCAGGGTGATTGATGCCATCCACACCCGCCACGCCAAGCT    596

BSNT_01866___    597 TACGGCAATGATTGTGACGAAAAAAGCGGACGAAATCAAGGAAGCCATTT    646
                     .||.|..||||||||.||.||.||||||||.||.|||||.||||||||||
BL05104___yit    597 CACCGTTATGATTGTCACAAAGAAAGCGGAGGAGATCAAAGAAGCCATTT    646

BSNT_01866___    647 ACGGAAAAATGGTGCGCGGCATCACAACTGTTCCGGCAAAAGGAGCTTTT    696
                     ||||.|..|||||.|||||.||.|||||.||||||||.|||||.||.|||
BL05104___yit    647 ACGGGAGGATGGTCCGCGGAATTACAACCGTTCCGGCGAAAGGCGCCTTT    696

BSNT_01866___    697 ACGAACGAACAGAAAGAAATGATGATTATCGTCATCACGAGGTATGAACT    746
                     |||||.||||||||||||||||||||.||.||||||||.|||||||||.|
BL05104___yit    697 ACGAATGAACAGAAAGAAATGATGATCATTGTCATCACAAGGTATGAATT    746

BSNT_01866___    747 GTACGATTTAGAAAAGATCGTCAAAGAAGTTGATCCGAAAGCATTTACGA    796
                     ||||||.||.|||||.|||.|.||.|||||||||||.|||||.||.||.|
BL05104___yit    747 GTACGACTTGGAAAAAATCATTAATGAAGTTGATCCAAAAGCTTTCACAA    796

BSNT_01866___    797 ACATCGTTCAAACGACAGGGATTTTTGGTTTCTTTAGAAAAGACTGA    843
                     ||.||||.||.||.|||..|.||||.||.||.||..|.|||||.|.|
BL05104___yit    797 ACGTCGTACAGACAACACAGGTTTTAGGGTTTTTCCGCAAAGATTAA    843


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