Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01866 and BL05104
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:22
# Commandline: needle
# -asequence dna-align/BSNT_01866___yitT.1.5803.seq
# -bsequence dna-align/BL05104___yitT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01866___yitT-BL05104___yitT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01866___yitT-BL05104___yitT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01866___yitT
# 2: BL05104___yitT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 847
# Identity: 659/847 (77.8%)
# Similarity: 659/847 (77.8%)
# Gaps: 8/847 ( 0.9%)
# Score: 2533.0
#
#
#=======================================
BSNT_01866___ 1 ATGGTACTAGATCAAACAAAAAAATTACTCATCGTCATCATCGGCGCTTT 50
|||||..|||...||.||||||||||..||||.||||||||||||||.||
BL05104___yit 1 ATGGTCATAGCGGAAGCAAAAAAATTGTTCATTGTCATCATCGGCGCCTT 50
BSNT_01866___ 51 ACTCAATGCTGCCGGGCTGAACTTATTTTTGATACCTGCAGATGTATATG 100
..|.|||||...|||..||||..|.|||.||||.||.||.|||||.||.|
BL05104___yit 51 GTTAAATGCCATCGGATTGAATCTGTTTCTGATTCCCGCCGATGTTTACG 100
BSNT_01866___ 101 CCAGCGGATTTACAGGTGTTGCCCAGCTTTTATCAAGCGTCG-TTGATCA 149
|||||||.|||||.||.||.||.|||||||||||.|||| || ||||.||
BL05104___yit 101 CCAGCGGCTTTACGGGGGTGGCGCAGCTTTTATCGAGCG-CGCTTGACCA 149
BSNT_01866___ 150 ATATGCCCCCTTTTACATATCGACGGGAACGCTCTTGTTCCTCTTAAACA 199
.||...|||..||||..|.||.|||||.|||||.|||||..|.|||||||
BL05104___yit 150 GTACAGCCCGATTTATTTTTCAACGGGGACGCTATTGTTTATTTTAAACA 199
BSNT_01866___ 200 TTCCGGTCGGTATTTTAGGATGGCTGAAGGTCGGCAAATCGTTTACAGTG 249
||||.|||||.|||.||||.|||||.||||||||....||.|||||.||.
BL05104___yit 200 TTCCCGTCGGGATTCTAGGGTGGCTCAAGGTCGGGCGCTCATTTACGGTC 249
BSNT_01866___ 250 TACAGCATTTTAAGTGTCGCACTCACTACTCTGTTTATGGGGATCCTGCC 299
|||||||||||.||.||.||..|.||.||..|.|||.|||||||.||.||
BL05104___yit 250 TACAGCATTTTGAGCGTGGCCTTGACGACGGTCTTTTTGGGGATGCTCCC 299
BSNT_01866___ 300 GGAAACAAGCCTGTCACATGACATTTTGCTGAACGCGGTGTTCGGCGGCG 349
.||..|.|||||||||.|.||||||||||||||.||.|||||||||||.|
BL05104___yit 300 TGAGGCGAGCCTGTCAAACGACATTTTGCTGAATGCCGTGTTCGGCGGGG 349
BSNT_01866___ 350 TCATTTCCGCAGTCGGTATCGGCTTAACATTAAAATACGGAGCTTCGACA 399
|.||..||||.|||||.||||||.|.||..|.||||||||.|||||.||.
BL05104___yit 350 TGATCGCCGCGGTCGGGATCGGCCTGACCCTTAAATACGGGGCTTCAACG 399
BSNT_01866___ 400 GGCGGGCTTGATATCGTCGCCATGGTGCTTGCAAAGTGGAAGGATAAACC 449
|||||..|.|||||..|.||.|||.|.||.|||||||||||.||.|||||
BL05104___yit 400 GGCGGTTTGGATATTATTGCGATGATCCTGGCAAAGTGGAAAGACAAACC 449
BSNT_01866___ 450 CGTCGGCACGTATTTCTTCATTCTGAACGG---GATTATCATCTTGACGG 496
.||||||||.||||||||.|||.|.||||| |||| ||.||.||.|
BL05104___yit 450 GGTCGGCACCTATTTCTTTATTTTAAACGGTGCGATT---ATTTTAACAG 496
BSNT_01866___ 497 CAGGATTATTGCAAGGTTGGGAGAAAGCATTATATACCCTGGTTACACTA 546
|||||||||||.|.||.||||||||||||||||||||.||.|||||||||
BL05104___yit 497 CAGGATTATTGAACGGATGGGAGAAAGCATTATATACGCTCGTTACACTA 546
BSNT_01866___ 547 TATGTGACAACGAGGGTGATCGACGCAATTCACACTCGCCACATGAAGCT 596
|||||||||||.||||||||.||.||.||.|||||.||||||...|||||
BL05104___yit 547 TATGTGACAACCAGGGTGATTGATGCCATCCACACCCGCCACGCCAAGCT 596
BSNT_01866___ 597 TACGGCAATGATTGTGACGAAAAAAGCGGACGAAATCAAGGAAGCCATTT 646
.||.|..||||||||.||.||.||||||||.||.|||||.||||||||||
BL05104___yit 597 CACCGTTATGATTGTCACAAAGAAAGCGGAGGAGATCAAAGAAGCCATTT 646
BSNT_01866___ 647 ACGGAAAAATGGTGCGCGGCATCACAACTGTTCCGGCAAAAGGAGCTTTT 696
||||.|..|||||.|||||.||.|||||.||||||||.|||||.||.|||
BL05104___yit 647 ACGGGAGGATGGTCCGCGGAATTACAACCGTTCCGGCGAAAGGCGCCTTT 696
BSNT_01866___ 697 ACGAACGAACAGAAAGAAATGATGATTATCGTCATCACGAGGTATGAACT 746
|||||.||||||||||||||||||||.||.||||||||.|||||||||.|
BL05104___yit 697 ACGAATGAACAGAAAGAAATGATGATCATTGTCATCACAAGGTATGAATT 746
BSNT_01866___ 747 GTACGATTTAGAAAAGATCGTCAAAGAAGTTGATCCGAAAGCATTTACGA 796
||||||.||.|||||.|||.|.||.|||||||||||.|||||.||.||.|
BL05104___yit 747 GTACGACTTGGAAAAAATCATTAATGAAGTTGATCCAAAAGCTTTCACAA 796
BSNT_01866___ 797 ACATCGTTCAAACGACAGGGATTTTTGGTTTCTTTAGAAAAGACTGA 843
||.||||.||.||.|||..|.||||.||.||.||..|.|||||.|.|
BL05104___yit 797 ACGTCGTACAGACAACACAGGTTTTAGGGTTTTTCCGCAAAGATTAA 843
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