Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01821 and BL05101
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:19
# Commandline: needle
# -asequence dna-align/BSNT_01821___gerPD.1.5803.seq
# -bsequence dna-align/BL05101___gerPD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01821___gerPD-BL05101___gerPD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01821___gerPD-BL05101___gerPD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01821___gerPD
# 2: BL05101___gerPD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 134/180 (74.4%)
# Similarity: 134/180 (74.4%)
# Gaps: 3/180 ( 1.7%)
# Score: 498.0
#
#
#=======================================
BSNT_01821___ 1 ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGACATCCGGAT 50
||||..|||||.||..|.||||||.|.||.||.||.||..|.||...|||
BL05101___ger 1 ATGAATTTTACCGTTGTGAACCGCTGTTTTGATGTAGGCAATATTGTGAT 50
BSNT_01821___ 51 GAACGGTGTGTCCAGTTCCTCCGTTTTCCACATCGGAGACACTGAATCCA 100
.|.|||||||||||.|||.||.|||||.|...||||.||.||.||.|.||
BL05101___ger 51 CACCGGTGTGTCCACTTCTTCTGTTTTTCTGGTCGGTGATACGGATTGCA 100
BSNT_01821___ 101 TCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATCGGG 150
|.|..|||||.||.||||||||||||||||||||||||||.|||.|||||
BL05101___ger 101 TTTCTCTGTCATCGATTTTTGATACACCGCCTGAATCTCTCATTGTCGGG 150
BSNT_01821___ 151 CCGTTTGTTCCGATTGCGCCAGAATAA--- 177
||||||||.|||.|.|||||.||||.|
BL05101___ger 151 CCGTTTGTCCCGCTGGCGCCGGAATCATGA 180
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