Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01709 and BL05093
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01709___serC.1.5803.seq
# -bsequence dna-align/BL05093___serC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01709___serC-BL05093___serC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01709___serC-BL05093___serC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01709___serC
# 2: BL05093___serC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1097
# Identity: 829/1097 (75.6%)
# Similarity: 829/1097 (75.6%)
# Gaps: 40/1097 ( 3.6%)
# Score: 3034.5
#
#
#=======================================
BSNT_01709___ 1 ATGGAACGTACAACGAATTTTAACGCAGGTCCTGCAGCGCTGCCACTGGA 50
|||..||||||||||||.|||||||||||.||.|||||.|||||..|.||
BL05093___ser 1 ATGATACGTACAACGAACTTTAACGCAGGACCAGCAGCACTGCCTTTAGA 50
BSNT_01709___ 51 AGTTCTGCAAAAAGCACAGAAAGAATTTATTGATTTTAACGAATCCGGCA 100
|||.||.||.||.|||.|..|.||||||.|||||||.||.|...|.||.|
BL05093___ser 51 AGTGCTTCAGAAGGCAAAAGACGAATTTCTTGATTTCAATGGTGCGGGGA 100
BSNT_01709___ 101 TGTCTGTTATGGAGCTTTCCCACCGCAGCAAAGAGTATGAAGCGGTGCAC 150
||||.||.||||||||.|||||.|||||||||||||||||.||.||.||.
BL05093___ser 101 TGTCCGTGATGGAGCTGTCCCATCGCAGCAAAGAGTATGACGCCGTTCAT 150
BSNT_01709___ 151 CAAAAAGCGAAAAGC-CTCTTAATCGAACTGATGGGCATTCCGGAAGATT 199
||||||||| ||||| ||.||||..||||||||||.|||.||.||.||||
BL05093___ser 151 CAAAAAGCG-AAAGCTCTGTTAAAAGAACTGATGGACATACCTGATGATT 199
BSNT_01709___ 200 ACGATATCTTGTTTCTTCAAGGCGGGGCAAGCCTTCAATTCTCAATGCTT 249
|.||..||.|||||||.||||||||.|||||||||||.||.||||||.||
BL05093___ser 200 ATGAAGTCATGTTTCTGCAAGGCGGAGCAAGCCTTCAGTTTTCAATGATT 249
BSNT_01709___ 250 CCGATGAACTTTTTAACACC--TGAAAAAACCGCACATTTTGTGATGACA 297
||||||||||||.| |.|| .||.|||||.||.||.||..|.||||||
BL05093___ser 250 CCGATGAACTTTCT--CTCCAAAGACAAAACGGCCCACTTCATTATGACA 297
BSNT_01709___ 298 GGCGCTTGGTCTGAAAAAGCACTGGCAGAAACGAAATTGTTCGGGAACAC 347
||||||||||||||||||||.|||||.|||.|.||..|.|||||.|||||
BL05093___ser 298 GGCGCTTGGTCTGAAAAAGCGCTGGCCGAAGCAAAGCTCTTCGGAAACAC 347
BSNT_01709___ 348 GTCTATCACCGCTACTAGTGAAACAGACAATTACAGCTATATTCCAGAGG 397
.||.||||.|||..|.||..||..|||.|..||||||||||||||.||.|
BL05093___ser 348 ATCGATCATCGCGTCCAGCAAAGAAGATACGTACAGCTATATTCCTGAAG 397
BSNT_01709___ 398 TTGACC-----TTACGGATGTAAAAGACGGCGCATATTTACATATCACAT 442
| ||| ||.||| .||||||.||.||..|.||..|.||.|
BL05093___ser 398 T--ACCGGAGATTCCGG------CAGACGGGGCCTACCTTCACCTGACTT 439
BSNT_01709___ 443 CCAACAATACAATTTTCGGCACTCAGTGGCAGGAGTTTCCGAATTCTCCT 492
||||||||||.||.||.||.||.||||||||..||||.||..|..||||.
BL05093___ser 440 CCAACAATACGATCTTTGGAACGCAGTGGCAAAAGTTCCCCGACGCTCCG 489
BSNT_01709___ 493 ATTCCGCTCGTAGCCGACATGTCCAGCGATATTTTAAGCAGAAAAATCGA 542
||||||.|.||.||.|||||||||||||||||||||||||||||||||||
BL05093___ser 490 ATTCCGGTTGTCGCGGACATGTCCAGCGATATTTTAAGCAGAAAAATCGA 539
BSNT_01709___ 543 TGTGTCCAAATTTGATGTGATCTACGGAGGCGCCCAAAAGAACCTCGGCC 592
|||.|||.|||||||..|.|||||.|..|||||.||.||.||||||||.|
BL05093___ser 540 TGTTTCCCAATTTGACATCATCTATGCCGGCGCTCAGAAAAACCTCGGAC 589
BSNT_01709___ 593 CTTCCGGCGTGACTGTAGTCATTATGAAAAAAAGCTGGCTGAAAAATGAA 642
|.||.||.|||||.||.|||||.|||||||||..||||||....||.|||
BL05093___ser 590 CGTCAGGGGTGACCGTTGTCATCATGAAAAAAGACTGGCTCGGCAAGGAA 639
BSNT_01709___ 643 AATGCGAACGTCCCAAAAATCCTGAAATATTCCACACATGTCAAAGCGGA 692
||||.|.|.||..|.|||||.|||||.||.||.|||||||.|||||||||
BL05093___ser 640 AATGAGCAAGTTGCCAAAATTCTGAAGTACTCAACACATGCCAAAGCGGA 689
BSNT_01709___ 693 TTCACTCTACAACACTCCGCCGACATTTGCGATTTATATGCTGAGCCTCG 742
|||.||||||||.||.||.||||||||||||||||||||||||...||||
BL05093___ser 690 TTCGCTCTACAATACCCCTCCGACATTTGCGATTTATATGCTGTCTCTCG 739
BSNT_01709___ 743 TTCTGGAATGGCTCAAGGAAAACGGCGGTGTGGAAGCTGTTGAACAGCGC 792
|.|||||.||||||||||||||.||.||..|.||.||..||||..|.|||
BL05093___ser 740 TGCTGGAGTGGCTCAAGGAAAAAGGAGGCCTCGATGCCATTGAGAAACGC 789
BSNT_01709___ 793 AA-TGAACAAAAAGCGCAGG--TTCTCTACA--GCTGTATTGATGAAAGC 837
|| .| |.||||| ||.|| ||.|.|||| || .||.||.||||||
BL05093___ser 790 AACCG--CGAAAAG-GCCGGAATTTTATACAATGC--GATCGACGAAAGC 834
BSNT_01709___ 838 AACGGCTTCTATAAAGGTCATGCCAGAAAGGACAGCCGCTCACGCATGAA 887
..|||.|||||....||.|||||.|||.|.||||||||||||..||||||
BL05093___ser 835 GGCGGATTCTACCGCGGCCATGCGAGAGAAGACAGCCGCTCAAACATGAA 884
BSNT_01709___ 888 TGTCACCTTCACGCTTCGGGATGACGAATTAACGAAAACATTCGTC-CAG 936
.||||||||.|||||.....||||.||..|.||...|.|||||.|| ||
BL05093___ser 885 CGTCACCTTTACGCTCAAAAATGATGAGCTGACAGCATCATTCATCGCA- 933
BSNT_01709___ 937 AAAGCAAAAGATGCGAAGATGATC-GGCCTTGGCGGACACCGTTCGGTGG 985
||.|||||.||.|..||.||| || ||.||||||||||||||||||||.|
BL05093___ser 934 AAGGCAAAGGAAGAAAAAATG-TCAGGGCTTGGCGGACACCGTTCGGTCG 982
BSNT_01709___ 986 GAGGCTGCCGCGCTTCTATTTATAACGCGGTCTCTCTCGAAGACTGTGAA 1035
|.||||||||||||||.|||||.||.||.||.||..|.||||||||.|||
BL05093___ser 983 GTGGCTGCCGCGCTTCGATTTACAATGCCGTATCAGTTGAAGACTGCGAA 1032
BSNT_01709___ 1036 AAATTAGCTGCGTTCATGAAGAAATTCCAGC--AGGAAAATGAGTAA 1080
||..|.|||||.||.||||||||||||| || ||.|||.|||
BL05093___ser 1033 AAGCTGGCTGCCTTTATGAAGAAATTCC-GCGAAGAAAACTGA---- 1074
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