Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03946 and BL05086
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence dna-align/BSNT_03946___yrhG.1.5803.seq
# -bsequence dna-align/BL05086___yrhG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03946___yrhG-BL05086___yrhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03946___yrhG-BL05086___yrhG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03946___yrhG
# 2: BL05086___yrhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 801
# Identity: 735/801 (91.8%)
# Similarity: 735/801 (91.8%)
# Gaps: 0/801 ( 0.0%)
# Score: 3411.0
#
#
#=======================================
BSNT_03946___ 1 ATGGCTTTTCGAAAACCGGATGAAATAGCGGAAGCAGCAATTGAAGCAGG 50
||||||||||||||||||||||||||||||.|.|||||||||||||||||
BL05086___yrh 1 ATGGCTTTTCGAAAACCGGATGAAATAGCGAATGCAGCAATTGAAGCAGG 50
BSNT_03946___ 51 GATGAAAAAAATAAAGCTCCCGTTGCCGTCACTGCTTGCGCTGGGGTTTT 100
||||||||||.||.||||||||.|||||||.|||||||...|||||||||
BL05086___yrh 51 GATGAAAAAAGTACAGCTCCCGCTGCCGTCTCTGCTTGTATTGGGGTTTT 100
BSNT_03946___ 101 TAGGCGGTGCATTTATTGCGCTTGGGTATTTGCTTGATATCAGGGTAATC 150
|||||||.||||||||.||||||||.||||||||||||||||||||||||
BL05086___yrh 101 TAGGCGGCGCATTTATCGCGCTTGGTTATTTGCTTGATATCAGGGTAATC 150
BSNT_03946___ 151 GGCGATCTTCCGAAAGAATGGGGGAGCCTGTCCAGTTTGATTGGTGCAGC 200
|||||.||.||||||||||||||.|||||||||||..||||.||.||.||
BL05086___yrh 151 GGCGACCTGCCGAAAGAATGGGGAAGCCTGTCCAGCCTGATCGGAGCTGC 200
BSNT_03946___ 201 AGTATTTCCCGTCGGTCTGATCCTTGTCGTTCTCGCTGGCGCTGAACTGA 250
.||||||||.|||||||||||.||.||.||.|||||||||||||||.|||
BL05086___yrh 201 CGTATTTCCTGTCGGTCTGATACTGGTGGTGCTCGCTGGCGCTGAATTGA 250
BSNT_03946___ 251 TCACAGGCAATATGATGTCAGTTGCGATGGCGTTATTTTCGAGAAAAATA 300
|||||||.|||||||||||.|||||||||||.||||||||.|||||||||
BL05086___yrh 251 TCACAGGGAATATGATGTCCGTTGCGATGGCTTTATTTTCAAGAAAAATA 300
BSNT_03946___ 301 TCAGTAAAAGAGTTAGCGATTAACTGGGGAATCGTCACAATTATGAACTT 350
|||.|||||.|.||.|||.|||||||||||||||||||.|||||||||||
BL05086___yrh 301 TCACTAAAACAATTGGCGGTTAACTGGGGAATCGTCACGATTATGAACTT 350
BSNT_03946___ 351 AATCGGCGCATTGTTTGTTGCGTACTTTTTCGGGCATTTGGTTGGATTGA 400
||||||||||.||||||||||.|||||||||||.||||||||||||||||
BL05086___yrh 351 AATCGGCGCACTGTTTGTTGCTTACTTTTTCGGACATTTGGTTGGATTGA 400
BSNT_03946___ 401 CTGAAACAGGTCCTTATTTAGAAAAAACGATTGCCGTTGCCCAAGGAAAG 450
||||||||||.||||||||||||||||||||.||||||||.||||||||.
BL05086___yrh 401 CTGAAACAGGCCCTTATTTAGAAAAAACGATCGCCGTTGCACAAGGAAAA 450
BSNT_03946___ 451 CTTGATATGAGCTTTGGCAAGGTTCTCATTTCCGCCATCGGCTGTAACTG 500
||.|||||||||||.|||||||||||||||||||.|||||||||||||||
BL05086___yrh 451 CTAGATATGAGCTTCGGCAAGGTTCTCATTTCCGGCATCGGCTGTAACTG 500
BSNT_03946___ 501 GCTTGTATGTCTTGCAGTGTGGCTTTCTTTCGGCGCCCAAGACGCAGCAG 550
|||||||||||||||.||.|||||||||||||||||.|||||||.|||||
BL05086___yrh 501 GCTTGTATGTCTTGCGGTATGGCTTTCTTTCGGCGCACAAGACGGAGCAG 550
BSNT_03946___ 551 GAAAAATCCTTGGCATCTGGTTCCCAACCATGGCTTTTGTGGCTATCGGA 600
|.|||||||||||||||||||||||||..|||||.||||||||.||||||
BL05086___yrh 551 GGAAAATCCTTGGCATCTGGTTCCCAATTATGGCGTTTGTGGCCATCGGA 600
BSNT_03946___ 601 TTTCAGCACGTTGTCGCCAACATGTTTGTGATTCCTGCTGCCATTTTTGC 650
|||||||||||||||||||||||||||||||||||.||.|||||||||||
BL05086___yrh 601 TTTCAGCACGTTGTCGCCAACATGTTTGTGATTCCCGCAGCCATTTTTGC 650
BSNT_03946___ 651 AGGCTCATTCACGTGGGGGCAGTTCATCGGAAACATCATTCCGGCTTTTA 700
||||||||||||.|||||||||||.|||||||||||||||||.|||||||
BL05086___yrh 651 AGGCTCATTCACCTGGGGGCAGTTTATCGGAAACATCATTCCTGCTTTTA 700
BSNT_03946___ 701 TCGGTAATGTCATCGGCGGAGCTGTATTTGTCGGTCTCATTTATTTTATT 750
||||.|||||||||||||||||.||.||||||||||||||||||||||||
BL05086___yrh 701 TCGGCAATGTCATCGGCGGAGCGGTGTTTGTCGGTCTCATTTATTTTATT 750
BSNT_03946___ 751 GCATATCATAAGAAAGACCGCTCCAGAAAAGAAATGAAGCAGGTGTCATG 800
|||||||.||||||||||||||||||||||||||||||||||||.|||||
BL05086___yrh 751 GCATATCCTAAGAAAGACCGCTCCAGAAAAGAAATGAAGCAGGTATCATG 800
BSNT_03946___ 801 A 801
|
BL05086___yrh 801 A 801
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