Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01495 and BL05082

See Amino acid alignment / Visit BSNT_01495 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:58
# Commandline: needle
#    -asequence dna-align/BSNT_01495___thiC.1.5803.seq
#    -bsequence dna-align/BL05082___thiC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01495___thiC-BL05082___thiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01495___thiC-BL05082___thiC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01495___thiC
# 2: BL05082___thiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1797
# Identity:    1407/1797 (78.3%)
# Similarity:  1407/1797 (78.3%)
# Gaps:          45/1797 ( 2.5%)
# Score: 5472.5
# 
#
#=======================================

BSNT_01495___      1 ATGCAAAACA--ATTCAGTGCAGCAAGCCAACATTTCCATTATGTCAAGT     48
                     |||  |||||  |.|||||.||||||...|||||.||.||.|||||||||
BL05082___thi      1 ATG--AAACAGGAATCAGTACAGCAAAAAAACATCTCGATAATGTCAAGT     48

BSNT_01495___     49 TTTTCAGGCAGCAAGAAGGTATACGTGGAGGGTTCTTCTTCGGACATCCA     98
                     ||||||||.|||...||.||.||.||.||.||.||...|.|.|||||.||
BL05082___thi     49 TTTTCAGGGAGCCGCAAAGTGTATGTCGAAGGGTCGCGTCCTGACATTCA     98

BSNT_01495___     99 AGTGCCGATGAGGGAGATCCTATTGAGTCCGACGACGGGATCGTTCGGCG    148
                     ||||||||||||.||.||....||.||||||||||||||.|||||.||||
BL05082___thi     99 AGTGCCGATGAGAGAAATTTCGTTAAGTCCGACGACGGGTTCGTTTGGCG    148

BSNT_01495___    149 AAGAGGAAAACGCGCCTGTGCGTGTCTATGATACAAGCGGACCGTATACG    198
                     |.||.||||||..||||||.||.|||||.||.||.|||||.||.||||||
BL05082___thi    149 ACGAAGAAAACCAGCCTGTCCGCGTCTACGACACGAGCGGCCCCTATACG    198

BSNT_01495___    199 GAC-CCTGAA---GTAACCATTAATATTC--AAGAAGGATTAAAGCCGCT    242
                     ||| ||  ||   |.|  |.||.||||||  |||  ||..|.||.||..|
BL05082___thi    199 GACGCC--AATGCGGA--CGTTGATATTCTTAAG--GGGCTGAAACCTTT    242

BSNT_01495___    243 CCG-----CCAAAAATGGATCACAGAGCGCGGTGACGTGGAAGAGTATGA    287
                     .||     ||     |||||||..||||||||.||....|||||.|||||
BL05082___thi    243 GCGGGCGACC-----TGGATCAGGGAGCGCGGCGATACCGAAGAATATGA    287

BSNT_01495___    288 AGGTCGGGCTATAAAACCAGAAGATAACGGTTATAAA---AAAGCAAATC    334
                     |||..|.|..||||.|||.||.||||||||.||||||   ||||..||..
BL05082___thi    288 AGGCAGAGAAATAAGACCGGAGGATAACGGCTATAAAGGCAAAGAGAAAG    337

BSNT_01495___    335 CAAACGTAAGCTACCCAGGATTAAAGCGGAAACCGCTGAGGGCGAAGGCA    384
                     |.|.|...|||||..||||.||.||.||.|||||||||.|.|||||...|
BL05082___thi    338 CGAGCCACAGCTATACAGGGTTGAAACGAAAACCGCTGCGCGCGAAAAAA    387

BSNT_01495___    385 GGTCAAAATGTCACACAAATGTACTATGCAAAAAAGGGGATCATTACACC    434
                     ||.|||||||||||.||..||.|.||.||||.|||||||||||||||.||
BL05082___thi    388 GGACAAAATGTCACTCAGCTGCATTACGCAAGAAAGGGGATCATTACGCC    437

BSNT_01495___    435 TGAGATGGAATTTATCGCCATTCGTGAGCATGTGTCTCCTGAATTCGTCA    484
                     .||||||||||||||.||.||..|.|||||.||.|||||.|||||.||..
BL05082___thi    438 CGAGATGGAATTTATTGCGATCAGAGAGCACGTATCTCCCGAATTTGTTC    487

BSNT_01495___    485 GAGACGAGGTAGCCAGCGGCCGGGCGATTATTCCTTCAAACATTAATCAC    534
                     |.||.||.||.||.|||||.||||||||||||||.||||||||.||.||.
BL05082___thi    488 GTGATGAAGTGGCAAGCGGACGGGCGATTATTCCGTCAAACATCAACCAT    537

BSNT_01495___    535 CCTGAAAGTGAGCCAATGATTATCGGCCGGAATTTTCATGTGAAGATTAA    584
                     ||.|||||.||.||.||||||||||||||.||.||.||.||.||.||.||
BL05082___thi    538 CCGGAAAGCGAACCGATGATTATCGGCCGCAACTTCCACGTCAAAATCAA    587

BSNT_01495___    585 TGCAAATATCGGGAATTCAGCGGTTACGTCATCCATTGAAGAAGAAGTGG    634
                     |||.||.|||||.|||||.||.||.||.||.||.||||||||||||||||
BL05082___thi    588 TGCCAACATCGGCAATTCCGCTGTCACCTCTTCGATTGAAGAAGAAGTGG    637

BSNT_01495___    635 AAAAAATGACGTGGGCCATCCGCTGGGGAGCGGATACGATGATGGATCTC    684
                     ||||||||||.|||||||||||||||||.||.||||||||||||||..|.
BL05082___thi    638 AAAAAATGACATGGGCCATCCGCTGGGGCGCTGATACGATGATGGACTTG    687

BSNT_01495___    685 TCTACCGGAAAAGATATTCATACGACGCGTGAATGGATTATCCGCAATTG    734
                     ||.||.||.||||||||||||||.|||.|.||||||||.||||||||.||
BL05082___thi    688 TCCACAGGTAAAGATATTCATACAACGAGAGAATGGATCATCCGCAACTG    737

BSNT_01495___    735 CCCCGTGCCTGTGGGAACTGTTCCGATTTATCAGGCGCTTGAAAAAGTAA    784
                     .||.||||||||||||||.||.||||||||||||||||||||||||||||
BL05082___thi    738 TCCGGTGCCTGTGGGAACAGTCCCGATTTATCAGGCGCTTGAAAAAGTAA    787

BSNT_01495___    785 ACGGCGTAGCGGAGGATTTAACGTGGGAGATTTATCGTGATACGCTAATC    834
                     |||||||.|||||.|||.|.||.|||||.|||||.||.|||||..|.|||
BL05082___thi    788 ACGGCGTCGCGGAAGATCTTACTTGGGACATTTACCGCGATACATTGATC    837

BSNT_01495___    835 GAGCAGGCAGAGCAGGGAGTGGATTATTTTACGATTCACGCGGGTGTTTT    884
                     ||.|||||.|||||.||.||.||||||||.|||||||||||.||.||..|
BL05082___thi    838 GAACAGGCTGAGCAAGGCGTTGATTATTTCACGATTCACGCCGGCGTCCT    887

BSNT_01495___    885 GCTTAGGTATGTACCGCTGACTGCCAAACG-GACAACTGGTATTGTGTCA    933
                     .||..|||||||.|||.|.||.||.||.|| |.| ||.||.||.||.||.
BL05082___thi    888 TCTCCGGTATGTGCCGTTAACAGCAAAGCGCGTC-ACCGGAATCGTATCC    936

BSNT_01495___    934 CGCGGGGGAGCGATTATGGCGCAGTGGTGTCTGGCTCATCATCAAGAAAG    983
                     |||||.||.|||||.||||||||.||||||.|||||||||||.|.|||||
BL05082___thi    937 CGCGGCGGGGCGATCATGGCGCAATGGTGTTTGGCTCATCATGAGGAAAG    986

BSNT_01495___    984 CTTTTTATACACACATTTTGAAGAAATCTGTGAGATTATGAAAACGTATG   1033
                     ||||.|.|||||.|||||||||||.||.||.||||||||||||||.||.|
BL05082___thi    987 CTTTCTGTACACCCATTTTGAAGAGATATGCGAGATTATGAAAACATACG   1036

BSNT_01495___   1034 ATATTGCTTTCTCTCTTGGGGATGGTTTGCGTCCCGGATCAATTGCTGAT   1083
                     ||||.||.||.||.||.||.||.|||.|.||||||||.||.|||||.|||
BL05082___thi   1037 ATATCGCATTTTCGCTCGGAGACGGTCTTCGTCCCGGCTCGATTGCCGAT   1086

BSNT_01495___   1084 GCCAATGACGAAGCGCAGTTTGCTGAATTAGAGACGCTTGGAGAGCTGAC   1133
                     ||.|||||.||.||.||.|||||.|||||.||||||||.||.||||||||
BL05082___thi   1087 GCGAATGATGAGGCCCAATTTGCCGAATTGGAGACGCTCGGCGAGCTGAC   1136

BSNT_01495___   1134 GCAAATTGCCTGGAAGCATGATGTTCAGGTGATGATTGAGGGTCCTGGAC   1183
                     |.||||.||||||||||||||||||||.||.|||||.||.||.||.||||
BL05082___thi   1137 GGAAATCGCCTGGAAGCATGATGTTCAAGTAATGATCGAAGGCCCGGGAC   1186

BSNT_01495___   1184 ATGTTCCGATGCATAAAATCAAAGAGAACGTCGATAAACAAATGGACATT   1233
                     |.||.|||||||||||||||||||||||.|||||.||.||.|||||.|||
BL05082___thi   1187 ACGTGCCGATGCATAAAATCAAAGAGAATGTCGACAAGCAGATGGAGATT   1236

BSNT_01495___   1234 TGTAAAGAAGCGCCTTTTTACACATTGGGGCCGTTGACAACGGATATTGC   1283
                     ||.|||||.||.||.||||||||..|.||.|||.||||.||.||||||||
BL05082___thi   1237 TGCAAAGAGGCACCGTTTTACACGCTCGGTCCGCTGACGACCGATATTGC   1286

BSNT_01495___   1284 TCCGGGATATGACCATATTACTTCAGCGATCGGAGCGGCGATGATCGGTT   1333
                     .|||||.||.|||||||||||.||.|||||||||||||||||||||||.|
BL05082___thi   1287 ACCGGGCTACGACCATATTACATCGGCGATCGGAGCGGCGATGATCGGCT   1336

BSNT_01495___   1334 GGTACGGGACAGCAATGCTTTGTTATGTAACGCCGAAGGAGCATTTGGGG   1383
                     |||||||.||.||.||||||||.|||||.||||||||||||||||||||.
BL05082___thi   1337 GGTACGGAACGGCCATGCTTTGCTATGTGACGCCGAAGGAGCATTTGGGA   1386

BSNT_01495___   1384 CTGCCAAACCGTGATGATGTTCGTGAAGGAGTCATTACATATAAGATCGC   1433
                     |||||.|||...||||||||.||.|||||.|||||.|||||.||.|||||
BL05082___thi   1387 CTGCCGAACAAAGATGATGTCCGCGAAGGCGTCATAACATACAAAATCGC   1436

BSNT_01495___   1434 TGCGCACGCTGCGGACCTTGCAAAAGGGCATCCCGGAGCGCAAATCCGGG   1483
                     .||.||.||.||.|||||||||||||||||.|||||.|||||||||||.|
BL05082___thi   1437 GGCCCATGCGGCTGACCTTGCAAAAGGGCACCCCGGCGCGCAAATCCGCG   1486

BSNT_01495___   1484 ATGATGCGTTATCGAAAGCCCGTTTTGAATTCCGCTGGCGGGATCAGTTT   1533
                     ||||.|||.|.||.||.||.||.||||||||||||||||||||||||||.
BL05082___thi   1487 ATGACGCGCTTTCAAAGGCGCGCTTTGAATTCCGCTGGCGGGATCAGTTC   1536

BSNT_01495___   1534 AATTTATCTCTTGATCCGGAGAGAGCCCTTGAATACCATGATGAAACCCT   1583
                     ||.||.||.||.||||||||.|||||.||.||||||||||||||||||||
BL05082___thi   1537 AACTTGTCGCTCGATCCGGAAAGAGCGCTCGAATACCATGATGAAACCCT   1586

BSNT_01495___   1584 GCCTGCTGAAGGAGCAAAAACCGCTCACTTTTGTTCCATGTGCGGTCCGA   1633
                     .||.||.|||||.||.|||||.||.|||||||||||.||||||||.||.|
BL05082___thi   1587 TCCGGCGGAAGGCGCCAAAACGGCACACTTTTGTTCAATGTGCGGGCCTA   1636

BSNT_01495___   1634 AATTTTGCAGCATGAGAATTTCACAGGATATTCGGGATTATGCGAAGAAA   1683
                     ||||||||||||||||.|||||.|||||||||||.||.||.||.|||.||
BL05082___thi   1637 AATTTTGCAGCATGAGGATTTCCCAGGATATTCGCGACTACGCCAAGGAA   1686

BSNT_01495___   1684 AACGATCTCAGTGAAGCAGAAGCCATAAATAAAGGATTAAAAGAAAAAGC   1733
                     |||.|.||...|||||.|.|.||.||..|.||||||||..||||.||.||
BL05082___thi   1687 AACAACCTTGATGAAGAAAAGGCTATCCAAAAAGGATTGGAAGAGAAGGC   1736

BSNT_01495___   1734 AAAAGAGTTTGTCGATA----CGGGAAGCA--ATTTATA-TCAATAA   1773
                     .||.||.|||    |.|    |.||..|||  |||||.| |.||   
BL05082___thi   1737 GAAGGAATTT----AAAAAAGCAGGCGGCAGCATTTACAGTTAA---   1776


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