Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01495 and BL05082
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:58
# Commandline: needle
# -asequence dna-align/BSNT_01495___thiC.1.5803.seq
# -bsequence dna-align/BL05082___thiC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01495___thiC-BL05082___thiC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01495___thiC-BL05082___thiC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01495___thiC
# 2: BL05082___thiC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1797
# Identity: 1407/1797 (78.3%)
# Similarity: 1407/1797 (78.3%)
# Gaps: 45/1797 ( 2.5%)
# Score: 5472.5
#
#
#=======================================
BSNT_01495___ 1 ATGCAAAACA--ATTCAGTGCAGCAAGCCAACATTTCCATTATGTCAAGT 48
||| ||||| |.|||||.||||||...|||||.||.||.|||||||||
BL05082___thi 1 ATG--AAACAGGAATCAGTACAGCAAAAAAACATCTCGATAATGTCAAGT 48
BSNT_01495___ 49 TTTTCAGGCAGCAAGAAGGTATACGTGGAGGGTTCTTCTTCGGACATCCA 98
||||||||.|||...||.||.||.||.||.||.||...|.|.|||||.||
BL05082___thi 49 TTTTCAGGGAGCCGCAAAGTGTATGTCGAAGGGTCGCGTCCTGACATTCA 98
BSNT_01495___ 99 AGTGCCGATGAGGGAGATCCTATTGAGTCCGACGACGGGATCGTTCGGCG 148
||||||||||||.||.||....||.||||||||||||||.|||||.||||
BL05082___thi 99 AGTGCCGATGAGAGAAATTTCGTTAAGTCCGACGACGGGTTCGTTTGGCG 148
BSNT_01495___ 149 AAGAGGAAAACGCGCCTGTGCGTGTCTATGATACAAGCGGACCGTATACG 198
|.||.||||||..||||||.||.|||||.||.||.|||||.||.||||||
BL05082___thi 149 ACGAAGAAAACCAGCCTGTCCGCGTCTACGACACGAGCGGCCCCTATACG 198
BSNT_01495___ 199 GAC-CCTGAA---GTAACCATTAATATTC--AAGAAGGATTAAAGCCGCT 242
||| || || |.| |.||.|||||| ||| ||..|.||.||..|
BL05082___thi 199 GACGCC--AATGCGGA--CGTTGATATTCTTAAG--GGGCTGAAACCTTT 242
BSNT_01495___ 243 CCG-----CCAAAAATGGATCACAGAGCGCGGTGACGTGGAAGAGTATGA 287
.|| || |||||||..||||||||.||....|||||.|||||
BL05082___thi 243 GCGGGCGACC-----TGGATCAGGGAGCGCGGCGATACCGAAGAATATGA 287
BSNT_01495___ 288 AGGTCGGGCTATAAAACCAGAAGATAACGGTTATAAA---AAAGCAAATC 334
|||..|.|..||||.|||.||.||||||||.|||||| ||||..||..
BL05082___thi 288 AGGCAGAGAAATAAGACCGGAGGATAACGGCTATAAAGGCAAAGAGAAAG 337
BSNT_01495___ 335 CAAACGTAAGCTACCCAGGATTAAAGCGGAAACCGCTGAGGGCGAAGGCA 384
|.|.|...|||||..||||.||.||.||.|||||||||.|.|||||...|
BL05082___thi 338 CGAGCCACAGCTATACAGGGTTGAAACGAAAACCGCTGCGCGCGAAAAAA 387
BSNT_01495___ 385 GGTCAAAATGTCACACAAATGTACTATGCAAAAAAGGGGATCATTACACC 434
||.|||||||||||.||..||.|.||.||||.|||||||||||||||.||
BL05082___thi 388 GGACAAAATGTCACTCAGCTGCATTACGCAAGAAAGGGGATCATTACGCC 437
BSNT_01495___ 435 TGAGATGGAATTTATCGCCATTCGTGAGCATGTGTCTCCTGAATTCGTCA 484
.||||||||||||||.||.||..|.|||||.||.|||||.|||||.||..
BL05082___thi 438 CGAGATGGAATTTATTGCGATCAGAGAGCACGTATCTCCCGAATTTGTTC 487
BSNT_01495___ 485 GAGACGAGGTAGCCAGCGGCCGGGCGATTATTCCTTCAAACATTAATCAC 534
|.||.||.||.||.|||||.||||||||||||||.||||||||.||.||.
BL05082___thi 488 GTGATGAAGTGGCAAGCGGACGGGCGATTATTCCGTCAAACATCAACCAT 537
BSNT_01495___ 535 CCTGAAAGTGAGCCAATGATTATCGGCCGGAATTTTCATGTGAAGATTAA 584
||.|||||.||.||.||||||||||||||.||.||.||.||.||.||.||
BL05082___thi 538 CCGGAAAGCGAACCGATGATTATCGGCCGCAACTTCCACGTCAAAATCAA 587
BSNT_01495___ 585 TGCAAATATCGGGAATTCAGCGGTTACGTCATCCATTGAAGAAGAAGTGG 634
|||.||.|||||.|||||.||.||.||.||.||.||||||||||||||||
BL05082___thi 588 TGCCAACATCGGCAATTCCGCTGTCACCTCTTCGATTGAAGAAGAAGTGG 637
BSNT_01495___ 635 AAAAAATGACGTGGGCCATCCGCTGGGGAGCGGATACGATGATGGATCTC 684
||||||||||.|||||||||||||||||.||.||||||||||||||..|.
BL05082___thi 638 AAAAAATGACATGGGCCATCCGCTGGGGCGCTGATACGATGATGGACTTG 687
BSNT_01495___ 685 TCTACCGGAAAAGATATTCATACGACGCGTGAATGGATTATCCGCAATTG 734
||.||.||.||||||||||||||.|||.|.||||||||.||||||||.||
BL05082___thi 688 TCCACAGGTAAAGATATTCATACAACGAGAGAATGGATCATCCGCAACTG 737
BSNT_01495___ 735 CCCCGTGCCTGTGGGAACTGTTCCGATTTATCAGGCGCTTGAAAAAGTAA 784
.||.||||||||||||||.||.||||||||||||||||||||||||||||
BL05082___thi 738 TCCGGTGCCTGTGGGAACAGTCCCGATTTATCAGGCGCTTGAAAAAGTAA 787
BSNT_01495___ 785 ACGGCGTAGCGGAGGATTTAACGTGGGAGATTTATCGTGATACGCTAATC 834
|||||||.|||||.|||.|.||.|||||.|||||.||.|||||..|.|||
BL05082___thi 788 ACGGCGTCGCGGAAGATCTTACTTGGGACATTTACCGCGATACATTGATC 837
BSNT_01495___ 835 GAGCAGGCAGAGCAGGGAGTGGATTATTTTACGATTCACGCGGGTGTTTT 884
||.|||||.|||||.||.||.||||||||.|||||||||||.||.||..|
BL05082___thi 838 GAACAGGCTGAGCAAGGCGTTGATTATTTCACGATTCACGCCGGCGTCCT 887
BSNT_01495___ 885 GCTTAGGTATGTACCGCTGACTGCCAAACG-GACAACTGGTATTGTGTCA 933
.||..|||||||.|||.|.||.||.||.|| |.| ||.||.||.||.||.
BL05082___thi 888 TCTCCGGTATGTGCCGTTAACAGCAAAGCGCGTC-ACCGGAATCGTATCC 936
BSNT_01495___ 934 CGCGGGGGAGCGATTATGGCGCAGTGGTGTCTGGCTCATCATCAAGAAAG 983
|||||.||.|||||.||||||||.||||||.|||||||||||.|.|||||
BL05082___thi 937 CGCGGCGGGGCGATCATGGCGCAATGGTGTTTGGCTCATCATGAGGAAAG 986
BSNT_01495___ 984 CTTTTTATACACACATTTTGAAGAAATCTGTGAGATTATGAAAACGTATG 1033
||||.|.|||||.|||||||||||.||.||.||||||||||||||.||.|
BL05082___thi 987 CTTTCTGTACACCCATTTTGAAGAGATATGCGAGATTATGAAAACATACG 1036
BSNT_01495___ 1034 ATATTGCTTTCTCTCTTGGGGATGGTTTGCGTCCCGGATCAATTGCTGAT 1083
||||.||.||.||.||.||.||.|||.|.||||||||.||.|||||.|||
BL05082___thi 1037 ATATCGCATTTTCGCTCGGAGACGGTCTTCGTCCCGGCTCGATTGCCGAT 1086
BSNT_01495___ 1084 GCCAATGACGAAGCGCAGTTTGCTGAATTAGAGACGCTTGGAGAGCTGAC 1133
||.|||||.||.||.||.|||||.|||||.||||||||.||.||||||||
BL05082___thi 1087 GCGAATGATGAGGCCCAATTTGCCGAATTGGAGACGCTCGGCGAGCTGAC 1136
BSNT_01495___ 1134 GCAAATTGCCTGGAAGCATGATGTTCAGGTGATGATTGAGGGTCCTGGAC 1183
|.||||.||||||||||||||||||||.||.|||||.||.||.||.||||
BL05082___thi 1137 GGAAATCGCCTGGAAGCATGATGTTCAAGTAATGATCGAAGGCCCGGGAC 1186
BSNT_01495___ 1184 ATGTTCCGATGCATAAAATCAAAGAGAACGTCGATAAACAAATGGACATT 1233
|.||.|||||||||||||||||||||||.|||||.||.||.|||||.|||
BL05082___thi 1187 ACGTGCCGATGCATAAAATCAAAGAGAATGTCGACAAGCAGATGGAGATT 1236
BSNT_01495___ 1234 TGTAAAGAAGCGCCTTTTTACACATTGGGGCCGTTGACAACGGATATTGC 1283
||.|||||.||.||.||||||||..|.||.|||.||||.||.||||||||
BL05082___thi 1237 TGCAAAGAGGCACCGTTTTACACGCTCGGTCCGCTGACGACCGATATTGC 1286
BSNT_01495___ 1284 TCCGGGATATGACCATATTACTTCAGCGATCGGAGCGGCGATGATCGGTT 1333
.|||||.||.|||||||||||.||.|||||||||||||||||||||||.|
BL05082___thi 1287 ACCGGGCTACGACCATATTACATCGGCGATCGGAGCGGCGATGATCGGCT 1336
BSNT_01495___ 1334 GGTACGGGACAGCAATGCTTTGTTATGTAACGCCGAAGGAGCATTTGGGG 1383
|||||||.||.||.||||||||.|||||.||||||||||||||||||||.
BL05082___thi 1337 GGTACGGAACGGCCATGCTTTGCTATGTGACGCCGAAGGAGCATTTGGGA 1386
BSNT_01495___ 1384 CTGCCAAACCGTGATGATGTTCGTGAAGGAGTCATTACATATAAGATCGC 1433
|||||.|||...||||||||.||.|||||.|||||.|||||.||.|||||
BL05082___thi 1387 CTGCCGAACAAAGATGATGTCCGCGAAGGCGTCATAACATACAAAATCGC 1436
BSNT_01495___ 1434 TGCGCACGCTGCGGACCTTGCAAAAGGGCATCCCGGAGCGCAAATCCGGG 1483
.||.||.||.||.|||||||||||||||||.|||||.|||||||||||.|
BL05082___thi 1437 GGCCCATGCGGCTGACCTTGCAAAAGGGCACCCCGGCGCGCAAATCCGCG 1486
BSNT_01495___ 1484 ATGATGCGTTATCGAAAGCCCGTTTTGAATTCCGCTGGCGGGATCAGTTT 1533
||||.|||.|.||.||.||.||.||||||||||||||||||||||||||.
BL05082___thi 1487 ATGACGCGCTTTCAAAGGCGCGCTTTGAATTCCGCTGGCGGGATCAGTTC 1536
BSNT_01495___ 1534 AATTTATCTCTTGATCCGGAGAGAGCCCTTGAATACCATGATGAAACCCT 1583
||.||.||.||.||||||||.|||||.||.||||||||||||||||||||
BL05082___thi 1537 AACTTGTCGCTCGATCCGGAAAGAGCGCTCGAATACCATGATGAAACCCT 1586
BSNT_01495___ 1584 GCCTGCTGAAGGAGCAAAAACCGCTCACTTTTGTTCCATGTGCGGTCCGA 1633
.||.||.|||||.||.|||||.||.|||||||||||.||||||||.||.|
BL05082___thi 1587 TCCGGCGGAAGGCGCCAAAACGGCACACTTTTGTTCAATGTGCGGGCCTA 1636
BSNT_01495___ 1634 AATTTTGCAGCATGAGAATTTCACAGGATATTCGGGATTATGCGAAGAAA 1683
||||||||||||||||.|||||.|||||||||||.||.||.||.|||.||
BL05082___thi 1637 AATTTTGCAGCATGAGGATTTCCCAGGATATTCGCGACTACGCCAAGGAA 1686
BSNT_01495___ 1684 AACGATCTCAGTGAAGCAGAAGCCATAAATAAAGGATTAAAAGAAAAAGC 1733
|||.|.||...|||||.|.|.||.||..|.||||||||..||||.||.||
BL05082___thi 1687 AACAACCTTGATGAAGAAAAGGCTATCCAAAAAGGATTGGAAGAGAAGGC 1736
BSNT_01495___ 1734 AAAAGAGTTTGTCGATA----CGGGAAGCA--ATTTATA-TCAATAA 1773
.||.||.||| |.| |.||..||| |||||.| |.||
BL05082___thi 1737 GAAGGAATTT----AAAAAAGCAGGCGGCAGCATTTACAGTTAA--- 1776
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