Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01422 and BL05073
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01422___sspK.1.5803.seq
# -bsequence dna-align/BL05073___sspK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01422___sspK-BL05073___sspK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01422___sspK-BL05073___sspK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01422___sspK
# 2: BL05073___sspK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity: 113/157 (72.0%)
# Similarity: 113/157 (72.0%)
# Gaps: 11/157 ( 7.0%)
# Score: 399.0
#
#
#=======================================
BSNT_01422___ 1 ATGGTCCGAAATAAAGAAAAAGGATTTCCTTACGAA----AACGAAAACA 46
||| |||||||||..||.|||.|||| |||| |||.|.||.|
BL05073___ssp 1 ATG---CGAAATAAATCAAGAGGCTTTC----CGAACATGAACAACAATA 43
BSNT_01422___ 47 AATTTCAGGGTGAACCGAGAGCAAAGGACGACTATGCTTCAAAGCGTGCT 96
|||||.|.||.||.||..|.||.||.||.||.|.||||||||||||..||
BL05073___ssp 44 AATTTGAAGGCGAGCCCCGGGCCAAAGATGATTTTGCTTCAAAGCGCCCT 93
BSNT_01422___ 97 GACGGATCTATCAATCAGCATCCTCAAGAAAGAATGAGAGCCTCAGGCAA 146
||||||...|..|||...||||||||||||||||||||.||.||.|||||
BL05073___ssp 94 GACGGAAGCACAAATACTCATCCTCAAGAAAGAATGAGGGCTTCCGGCAA 143
BSNT_01422___ 147 ACGGTAA 153
|||.|||
BL05073___ssp 144 ACGCTAA 150
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