Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01272 and BL05068
See
Amino acid alignment /
Visit
BSNT_01272 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:47
# Commandline: needle
# -asequence dna-align/BSNT_01272___yflS.1.5803.seq
# -bsequence dna-align/BL05068___yflS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01272___yflS-BL05068___yflS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01272___yflS-BL05068___yflS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01272___yflS
# 2: BL05068___yflS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1462
# Identity: 1110/1462 (75.9%)
# Similarity: 1110/1462 (75.9%)
# Gaps: 50/1462 ( 3.4%)
# Score: 4165.0
#
#
#=======================================
BSNT_01272___ 1 ATGGCTTCAGAAAAAGACGCAGGAAAACAGTCAGCAGTAAAGCTTGTTCC 50
.|||||..|||||||||.||||.|.||.|.||.|||.|.||..|..||||
BL05068___yfl 1 GTGGCTAAAGAAAAAGATGCAGAACAAAAATCGGCACTGAACATCATTCC 50
BSNT_01272___ 51 -ATTGC--------TTATTACTGTCGCTGTGGGACTAATCATCTGGTTTA 91
.|||| || ||| ||||..|.|| |.||.|||||||
BL05068___yfl 51 TCTTGCGGTCACGATT-TTA--GTCGGAGCGG------TTATTTGGTTTA 91
BSNT_01272___ 92 TTCC--CGCTCCGTCCGGACTTGAACCTAAAGCTTGGCATTTGTTTGCGA 139
|||| ||| ||| |||||.|.||.||.|||||.|||||.||.|||||.|
BL05068___yfl 92 TTCCGTCGC-CCG-CCGGATTGGACCCGAAAGCATGGCACTTATTTGCAA 139
BSNT_01272___ 140 TTTTTGTCGCAACAATTATCGGCTTTATCTCCAAGCCCTTGCCAATGGGT 189
|.|||||.|||||.||||||||||||||.||.||.||..||||.|||||.
BL05068___yfl 140 TCTTTGTGGCAACGATTATCGGCTTTATATCAAAACCGCTGCCGATGGGG 189
BSNT_01272___ 190 GCAATTGCAATTTTTGCATTGGCGGTTACTGCACTAACTGGAACACTATC 239
|||||.||..|.||.|||||||||.|.||.||.||.||||||||.||.||
BL05068___yfl 190 GCAATCGCCGTATTCGCATTGGCGATCACGGCGCTCACTGGAACGCTGTC 239
BSNT_01272___ 240 AATTGAGGATACATTAAGCGGATTCGGGAATAAGACCATTTGGCTTATCG 289
.|||||.||.||..|.|||||.||.||.||.|||||.||||||||.||||
BL05068___yfl 240 GATTGAAGAAACGCTCAGCGGGTTTGGAAACAAGACGATTTGGCTGATCG 289
BSNT_01272___ 290 TTATCGCATTCTTTATTTCCCGGGGATTTATCAAAACCGGGCTCGGTGCT 339
|.||.||.||.||||||||.|||||||||||.||||||||..|.|||||.
BL05068___yfl 290 TCATTGCCTTTTTTATTTCGCGGGGATTTATTAAAACCGGTTTAGGTGCG 339
BSNT_01272___ 340 AGAATTTCGTATGTATTCGTTCAGAAATTCGGGAAAAAAACCCTTGGACT 389
.||||..|.|||.||||.||.|.||..|||||.||||||||.||.|||||
BL05068___yfl 340 CGAATCGCCTATTTATTTGTACGGATGTTCGGCAAAAAAACACTCGGACT 389
BSNT_01272___ 390 TTCTTATTCACTGCTATTCAGTGATTTAATACTTTCACCTGCTATTCCAA 439
.||.||||||||.||..||||.|||||.||..|.||.||.||.||.||.|
BL05068___yfl 390 CTCGTATTCACTCCTTGTCAGCGATTTGATTTTATCGCCGGCGATCCCGA 439
BSNT_01272___ 440 GTAATACGGCGCGTGCAGGAGGCATTATATTTCCTATTATCAGATCATTA 489
|||||||.||.|||||.||.||.|||||.|||||.||||||.|.||.|||
BL05068___yfl 440 GTAATACCGCACGTGCCGGGGGAATTATTTTTCCGATTATCCGTTCGTTA 489
BSNT_01272___ 490 TCCGAAA-----CATTCG--GATCAAGCCCGGCAAATGGAACAGAGAGGA 532
||||||| ||.||| |..||||..|||| |.||||| ||.
BL05068___yfl 490 TCCGAAACTTTTCAGTCGACGCCCAAGGACGGC--ACGGAAC-----GGC 532
BSNT_01272___ 533 AAATCGGTGCATTTTTATTAAAAACCGGT----TTTCAGGGGAATCTGAT 578
..|||||.||.||.||..|.|| ||| |||||||||||..||||
BL05068___yfl 533 GCATCGGCGCTTTCTTGCTGAA----GGTGGGCTTTCAGGGGAACTTGAT 578
BSNT_01272___ 579 CACATCTGCTATGTTCCTGACAGCGATGGCGGCGAACCCGCTGATTGCCA 628
|||.|||||.||||||.|.||.||.||||||||.||||||||||||||||
BL05068___yfl 579 CACTTCTGCGATGTTCTTAACGGCTATGGCGGCAAACCCGCTGATTGCCA 628
BSNT_01272___ 629 AGCTGGCCCATGATGTCGCAGGGGTGGACTTAACATGGACAAGCTGGGCA 678
|.||.|||||||||||.|||||.|||.|..|.||.||||||||||||||.
BL05068___yfl 629 AACTTGCCCATGATGTGGCAGGTGTGAATCTGACCTGGACAAGCTGGGCT 678
BSNT_01272___ 679 ATTGCCGCGATTGTGCCGGGACTTGTAAGCTTAATCATCACGCCGCTTGT 728
.|.||.||.||.||.|||||||||||.|||||.||||||||.||||||||
BL05068___yfl 679 GTGGCGGCCATCGTCCCGGGACTTGTCAGCTTGATCATCACCCCGCTTGT 728
BSNT_01272___ 729 GATTTACAAGCTGTATCCGCCGGAAATCAAAGAAACACCGGATGCGGCGA 778
.|||||.||.|||||||||||.||..|.|||.||||.||.||||||||||
BL05068___yfl 729 CATTTATAAACTGTATCCGCCTGAGGTGAAAAAAACGCCTGATGCGGCGA 778
BSNT_01272___ 779 AAATCGCAACAGAAAAACTGAAAGAAATGGGACCGTTCAAAAAATCAGAG 828
|||||||||||||.||.||.|||||||||||.||||||||||||||.||.
BL05068___yfl 779 AAATCGCAACAGAGAAGCTCAAAGAAATGGGCCCGTTCAAAAAATCGGAA 828
BSNT_01272___ 829 CTTTCCATGGTTATCGTGTTTCTTTTG---GTGCTTGTGCTGTGGATTTT 875
||.||.|||| |||.|.|..||||| ||.|||.|..|.||||||||
BL05068___yfl 829 CTCTCTATGG---TCGCGGTCTTTTTGCTCGTCCTTTTTTTATGGATTTT 875
BSNT_01272___ 876 TGGCGGCAGCTTCAACATCGACGCAACCACAACCGCATTGATCGGTTTGG 925
.||.||||.|.|.||.||.|||||.||.|||||.||||||||||||||.|
BL05068___yfl 876 CGGAGGCAACCTGAATATTGACGCGACAACAACGGCATTGATCGGTTTAG 925
BSNT_01272___ 926 CCGTTCTATTATTATCACAAGTTCTGACTTGGGATGATATCAAGAAAGAA 975
||||.||..|.||..||||.||||||||.|||||.|||||.||||||||.
BL05068___yfl 926 CCGTCCTGCTTTTGACACAGGTTCTGACGTGGGACGATATTAAGAAAGAG 975
BSNT_01272___ 976 CAGGGCGCTTGGGATACGCTCACTTGGTTTGCGGCGCTTGTCATGCTCGC 1025
||.|||||.|||||||||||.||.||||||||.|||||.||||||||.||
BL05068___yfl 976 CAAGGCGCATGGGATACGCTGACATGGTTTGCCGCGCTCGTCATGCTGGC 1025
BSNT_01272___ 1026 CAACTTCTTGAATGAATTAGGCATGGTATCTTGGTTCAGTAATGCCATGA 1075
.|.|||||||||||||.|.||||||||....||||||||..||||.||||
BL05068___yfl 1026 GAGCTTCTTGAATGAACTCGGCATGGTCGGCTGGTTCAGCGATGCGATGA 1075
BSNT_01272___ 1076 AATCATCCGTATCAGGGTTCTCTTGGATTGTGGCATTTATCATTTTAATT 1125
||||.|..||.|||||.|||||.|||||....||||||.|||||||||||
BL05068___yfl 1076 AATCGTATGTTTCAGGATTCTCCTGGATCAGCGCATTTCTCATTTTAATT 1125
BSNT_01272___ 1126 GTTGTGTATTATTACTCTCACTATTTCTTTGCAAGTGCGACAGCCCACAT 1175
|..||.||.|||||.||.||.|||||||||||.|||||.||.||.||.||
BL05068___yfl 1126 GCGGTTTACTATTATTCGCATTATTTCTTTGCGAGTGCAACCGCTCATAT 1175
BSNT_01272___ 1176 CAGTGCGATGTATTCAGCATTTTTGGCTGTCGTCGTGGCAGCGGGCGCAC 1225
|||.|||||||||||.||.|||.|.||.||..|..|.||.||.|||||.|
BL05068___yfl 1176 CAGCGCGATGTATTCGGCCTTTCTCGCCGTGATTATCGCTGCAGGCGCTC 1225
BSNT_01272___ 1226 CGCCGCTTTTAGCAGCGCTGAGCCTCGCGTTCATCAGCAACCTGTTCGGG 1275
||||||||.|.|||||..|.|||||.|||||..||||||||||.||.|..
BL05068___yfl 1226 CGCCGCTTCTCGCAGCATTAAGCCTTGCGTTTTTCAGCAACCTTTTTGCT 1275
BSNT_01272___ 1276 TCAACGACTCACTACGGTTCTGGAGCGGCTCCGGTCTTCTTCGGAGCAGG 1325
||.||.||.||.|||||..|.|||||||||||.|||||.|||||.||.||
BL05068___yfl 1276 TCGACAACGCATTACGGAGCGGGAGCGGCTCCCGTCTTTTTCGGGGCCGG 1325
BSNT_01272___ 1326 CTACATCCCACAAGGCAAATGGTGGTCCATCGGATTTATCCTGTCGATTG 1375
|||.||.||.|||.|||||||||||||.|||||.||.|||.|||||||||
BL05068___yfl 1326 CTATATTCCGCAAAGCAAATGGTGGTCAATCGGCTTCATCTTGTCGATTG 1375
BSNT_01272___ 1376 TTCATATCATCGTATGGCTTGTGATCGGCGGATTATGGTGGAAAGTACTA 1425
|||||||..|...|||||||||..||||.||.||||||||||||.||||.
BL05068___yfl 1376 TTCATATTGTGACATGGCTTGTTGTCGGAGGGTTATGGTGGAAATTACTG 1425
BSNT_01272___ 1426 GGAATATGGTAG 1437
||.||||||||.
BL05068___yfl 1426 GGCATATGGTAA 1437
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.