Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01043 and BL05049

See Amino acid alignment / Visit BSNT_01043 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence dna-align/BSNT_01043___tatCY.1.5803.seq
#    -bsequence dna-align/BL05049___tatCY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01043___tatCY-BL05049___tatCY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01043___tatCY-BL05049___tatCY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01043___tatCY
# 2: BL05049___tatCY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     566/804 (70.4%)
# Similarity:   566/804 (70.4%)
# Gaps:          84/804 (10.4%)
# Score: 1963.0
# 
#
#=======================================

BSNT_01043___      1 ATGAAAGTGAATCAAATGTCGCTGCTGGAGCATATTGCTGAGCTTCGAAA     50
                     |||||.|..||..|||||||||||.|.||.|||||..|.||.||.||.|.
BL05049___tat      1 ATGAAGGGAAAAGAAATGTCGCTGTTAGAACATATCACAGAACTGCGCAG     50

BSNT_01043___     51 ACGG-TTGCTGATTGTAGCGCTGGCGTTTGTC------GTTTTCTTTATT     93
                     |||| ||| ||||     |.||    |||.||      |||||.|||.||
BL05049___tat     51 ACGGCTTG-TGAT-----CACT----TTTTTCTTTTTTGTTTTGTTTGTT     90

BSNT_01043___     94 ---GCTGGATTTTTTTTAGCAAAGCCGATTATTGTGTATCTGCAAGAAAC    140
                        ||.||.||||||||.||.||||||.|.||..|.||.|||||..|.||
BL05049___tat     91 GCGGCAGGCTTTTTTTTGGCGAAGCCGCTCATAATCTACCTGCAGCAGAC    140

BSNT_01043___    141 AGATGAAGCGAAGCAGCTTACGCTTAACGCGTTTAACCTGACAGACCCGC    190
                     .|||||||||||||.|||.||.||.||.|||||.||.|||||.||.|  |
BL05049___tat    141 GGATGAAGCGAAGCTGCTGACTCTCAATGCGTTCAAGCTGACCGATC--C    188

BSNT_01043___    191 TTTATGTGTTTA--TGCAGTTTGCGTTTATCATCGGCATAGTCCTGACCT    238
                     |||||.|||.||  |||||||.|||||.|||||||||...|||.||||.|
BL05049___tat    189 TTTATTTGTGTACGTGCAGTTCGCGTTCATCATCGGCGCTGTCTTGACTT    238

BSNT_01043___    239 CGCCAGTTATTCTTTATCAGCTTTGGGCTTTTGTGAGCCCGGGTCTCTAT    288
                     ||||..||.||||.||.|||||.||||||||..|.||||||||.||.|||
BL05049___tat    239 CGCCGCTTGTTCTATACCAGCTGTGGGCTTTCATCAGCCCGGGGCTGTAT    288

BSNT_01043___    289 GAGAAAGAGCGCAAAGTAACGCTCAGCTACATTCCGATCTCTATTTTGCT    338
                     ||.|||||.||.|||||.|||||||||||.|||||.||.||.||..|.||
BL05049___tat    289 GAAAAAGAACGAAAAGTGACGCTCAGCTATATTCCAATATCGATCATTCT    338

BSNT_01043___    339 GTTTTTAGCGGGCTTATCTTTTTCATATTATATTTTATTTCCTTTTGTTG    388
                     .|||||||..|||.|..|.|||||.||.|.||||||||||||.|||||.|
BL05049___tat    339 TTTTTTAGGCGGCATTGCCTTTTCTTACTTTATTTTATTTCCGTTTGTCG    388

BSNT_01043___    389 TTGATTTTATGA--AGCGGATCTCTCAG--GACTTGAATGTCAATCAGGT    434
                     |.||.|||||||  ||.|    ||||||  ||..||||||||||.|||||
BL05049___tat    389 TGGACTTTATGACGAGAG----TCTCAGATGATCTGAATGTCAACCAGGT    434

BSNT_01043___    435 GATCGGAATTAATGAATATTTTCATTTTCTTCTGCAGCTGACGATTCCGT    484
                     .||||||||..|.|||||||||||.|||||.||.|||.|||||.||||.|
BL05049___tat    435 CATCGGAATACACGAATATTTTCAGTTTCTGCTTCAGTTGACGCTTCCTT    484

BSNT_01043___    485 TTGGACTGCTGTTCCAAATGCC---GGTCATCCTTATGTTTTTGACCAGG    531
                     ||||..||.||||.||.|||||   |||||||   ||||||.|.||.|||
BL05049___tat    485 TTGGCTTGTTGTTTCAGATGCCTGTGGTCATC---ATGTTTATCACAAGG    531

BSNT_01043___    532 CTCGGAATTGTGACACCGATGTTCTTGGCGAAAATCAGAAAGTATGCGTA    581
                     |||||..|.|||||.||||||||.||||||||||||.||||.|||||.||
BL05049___tat    532 CTCGGTCTCGTGACGCCGATGTTTTTGGCGAAAATCCGAAAATATGCATA    581

BSNT_01043___    582 TTTTACGCTGCTGGTGATCGCAGCCCTGATTACACCGCCTGAGCTTCTGT    631
                     ||||..|.||.|.||.||.||.||.||.|||||||||||||||.|..|||
BL05049___tat    582 TTTTGTGTTGTTCGTCATTGCGGCGCTCATTACACCGCCTGAGTTATTGT    631

BSNT_01043___    632 CCCATATGATGGTCACAGTCCCGCTTTTGATTTTATATGAAATCAGTATT    681
                     |.|||.|.||||||.|.||.||..|..|.|||.|.||||||||||||||.
BL05049___tat    632 CGCATTTAATGGTCTCCGTGCCATTGCTCATTCTTTATGAAATCAGTATC    681

BSNT_01043___    682 CTGATATC--GAAGGCCGCCTATC-----GGAAAGCGCAGAAAAGCAGTG    724
                     .||||.||  |||       ||||     ||.|.||||| ||||.||.| 
BL05049___tat    682 GTGATTTCAAGAA-------TATCCTACAGGCAGGCGCA-AAAAACAAT-    722

BSNT_01043___    725 CAGCCGAT----CAGGA--------CGTGTCTTCTGTGC----------A    752
                          |||    .||||        |||   ||.||..|          |
BL05049___tat    723 -----GATTCAAGAGGAAAATCAATCGT---TTTTGAACGACCATACAAA    764

BSNT_01043___    753 ATAA    756
                     ||||
BL05049___tat    765 ATAA    768


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01043 and BL05049

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
