Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00758 and BL05038
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:23
# Commandline: needle
# -asequence dna-align/BSNT_00758___gsiB.1.5803.seq
# -bsequence dna-align/BL05038___gsiB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00758___gsiB-BL05038___gsiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00758___gsiB-BL05038___gsiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00758___gsiB
# 2: BL05038___gsiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 443
# Identity: 321/443 (72.5%)
# Similarity: 321/443 (72.5%)
# Gaps: 73/443 (16.5%)
# Score: 1352.5
#
#
#=======================================
BSNT_00758___ 1 ATGGCAGATAAT---------AACAAAATGAGCAGAGAAGAAGCAGGTAG 41
||||||.|.||| ||||||||||||||.|||||||||||.||
BL05038___gsi 1 ATGGCAAACAATAATGACGACAACAAAATGAGCAGGGAAGAAGCAGGCAG 50
BSNT_00758___ 42 AAAAGGCGGAGAAACAACAAGCAAGAACCATGACAAAGAATTCTATCAAG 91
||||||||||||||.|||||||.|.||||||||.|||||||||||.||||
BL05038___gsi 51 AAAAGGCGGAGAAAAAACAAGCCAAAACCATGATAAAGAATTCTACCAAG 100
BSNT_00758___ 92 AGATTGGTCAAAAAGGCGGAGAAGCCACTAGCAAAAACCATGACAAAGAA 141
||||.||||||||||||||||||||.||.|||.|||||||||||||||||
BL05038___gsi 101 AGATCGGTCAAAAAGGCGGAGAAGCTACAAGCCAAAACCATGACAAAGAA 150
BSNT_00758___ 142 TTCTATCAAGAGATTGGTCAAAAAGGCGGAGAAGCCACTAGCAAGAATCA 191
|||||.||.||.||.||..||||||||||.||||||||.|||...||.||
BL05038___gsi 151 TTCTACCAGGAAATCGGCGAAAAAGGCGGGGAAGCCACAAGCCGCAACCA 200
BSNT_00758___ 192 TGACAAAGAGTTCTATCAAGAAATCGGTGAAAAAGGCGGAGAAGCCACTA 241
|||||||||||||||.||.||||||||.||||||||||||||||||||.|
BL05038___gsi 201 TGACAAAGAGTTCTACCAGGAAATCGGCGAAAAAGGCGGAGAAGCCACAA 250
BSNT_00758___ 242 GCAAAAACCATGACAAAGAATTCTATCAAGAAATCGGCCGAAAA-GGCGG 290
||...||||||||.|||||||||||.||||||||||| .||||| |||||
BL05038___gsi 251 GCCGCAACCATGATAAAGAATTCTACCAAGAAATCGG-TGAAAAGGGCGG 299
BSNT_00758___ 291 AGAGGCAACAAGCAAAAATCATGATAAAGAATTCTACCAAGAAATTGGCT 340
|||.||.|||||||||||.|||||.||||||||||||||.||.||.||..
BL05038___gsi 300 AGAAGCCACAAGCAAAAACCATGACAAAGAATTCTACCAGGAGATCGGTA 349
BSNT_00758___ 341 CAAAAGGCGGAAACGC------CCGCAACAACGACTAA------------ 372
.||||||||||.|.|| |||||||.|.||| ||
BL05038___gsi 350 AAAAAGGCGGAGAAGCCACAAGCCGCAACCATGAC-AAGGAGTTCTATCA 398
BSNT_00758___ 372 ------------------------------------------- 372
BL05038___gsi 399 AGAAAACGGCGAAAAAGGCGGACGCCAAAGAAGAAGCGGTTAA 441
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