Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00449 and BL05022
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:05
# Commandline: needle
# -asequence dna-align/BSNT_00449___yczA.1.5803.seq
# -bsequence dna-align/BL05022___rtpA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00449___yczA-BL05022___rtpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00449___yczA-BL05022___rtpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00449___yczA
# 2: BL05022___rtpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 110/179 (61.5%)
# Similarity: 110/179 (61.5%)
# Gaps: 34/179 (19.0%)
# Score: 300.0
#
#
#=======================================
BSNT_00449___ 1 ATGGTCATTGCAACTGATGATCTTGAGGTCG-CATGTCCTAAATG---TG 46
|||||.||||||||.||.||| |||....|| |||||||.||.|| ||
BL05022___rtp 1 ATGGTGATTGCAACGGACGAT-TTGGAAACGACATGTCCAAATTGCAATG 49
BSNT_00449___ 47 AAAGAGCGGGAGAAATCGAA-----GGAACACCTTGCCCGGCCTGCAGCG 91
.| |||||.||| ||| ||| .|||||.||....||....|
BL05022___rtp 50 GA--AGCGGAAGA----GAAGAGCCGGA--GCCTTGTCCAAAATGTTCGG 91
BSNT_00449___ 92 GAAAAGGTGTTATTCTGACTGCTCA----AGGATATACGCTTCTGGATTT 137
|||||||.||.|||.||||.||.|| ||.|.|| |.||..||||
BL05022___rtp 92 GAAAAGGCGTGATTTTGACGGCGCAGGGCAGCACAT----TGCTCCATTT 137
BSNT_00449___ 138 TATCCAAAAGCATTT----GAATAAGTAA 162
|||..||||.|||.| ||||||
BL05022___rtp 138 TATAAAAAAACATCTCAACGAATAA---- 162
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