Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00457 and BL05020
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00457.1.5803.seq
# -bsequence dna-align/BL05020___ycbO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00457-BL05020___ycbO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00457-BL05020___ycbO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00457
# 2: BL05020___ycbO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity: 505/711 (71.0%)
# Similarity: 505/711 (71.0%)
# Gaps: 48/711 ( 6.8%)
# Score: 1726.5
#
#
#=======================================
BSNT_00457 1 TTGATGAATTTGATCAGAATCGAATTAAGAAAAA--TGAAAATGGGCTGG 48
|||.||||||||||.|||||.||| |.|||||| ||||..||||.|||
BL05020___ycb 1 TTGCTGAATTTGATGAGAATTGAA--ATGAAAAAGCTGAAGCTGGGATGG 48
BSNT_00457 49 TATATCAGAGGTGCCCTCATTGCCAACGTGATCATTATGGGTTTTATGTG 98
|||||..|.||.|||.||.|||||||..|.||||||.|.||||||.||||
BL05020___ycb 49 TATATACGCGGAGCCGTCTTTGCCAATTTCATCATTTTTGGTTTTCTGTG 98
BSNT_00457 99 GCTGATCAGTTATTCC-GAAAAAGCCGATGGCGGGGTTTCGTTCCAAAGT 147
|.||.|.| || |.| |.||.|||..||...|||||||||..
BL05020___ycb 99 GATGGTGA------CCTGCA----CAGAAGGCAAGGAGACGTTCCAAACG 138
BSNT_00457 148 ACGGATGAAGCATTCCTCATCATCGGCACCTTCGTCAGAGCGGTATTTAT 197
|..||||||.|.||.||..|.||||||||.||.||.|||||.||.|||||
BL05020___ycb 139 ATTGATGAAACTTTTCTATTGATCGGCACTTTTGTTAGAGCCGTTTTTAT 188
BSNT_00457 198 CGTATTTGGCGCTGTGCTGATCGTAAAATTGGTGATTTCGGAATATAAAA 247
||||||.|||||||||||||||..||||||.||||||||.||.|.|||||
BL05020___ycb 189 CGTATTCGGCGCTGTGCTGATCTCAAAATTAGTGATTTCAGAGTTTAAAA 238
BSNT_00457 248 ACAAAACCATTCTTGTGATGTTCACGTACCCGATCAGCCGTAAAAAGCTG 297
||||.||.||.||.||||||||||||||.|||||||..||.||.||.|||
BL05020___ycb 239 ACAAGACAATACTGGTGATGTTCACGTATCCGATCAATCGAAAGAAACTG 288
BSNT_00457 298 CTCACCGCTAAGCTCATGATCGCGGGCGGACTGACGTTTATCACGATTTT 347
||..|.|||||.||..|||||||.|||||.|||||.||..|.|||||.||
BL05020___ycb 289 CTGGCTGCTAAACTGCTGATCGCAGGCGGGCTGACCTTCGTTACGATATT 338
BSNT_00457 348 ACTTTCAAATATACTCA----TAGCCGCCGGTTTCTTTTGGCTGAACTCG 393
..|.|||| ||.|| |.||.|..|||||.|||..|||||||||.
BL05020___ycb 339 GATATCAA----ACGCATGCGTTGCAGTTGGTTTTTTTCTGCTGAACTCA 384
BSNT_00457 394 ATCTGCCAT---TTCATACCGGGAGAGCTTA----CTTCCGAGATCATTT 436
|||| || .||||.||.||.|| .||| |||| .|||...|
BL05020___ycb 385 ATCT---ATGGGATCATCCCCGGCGA-ATTAACAGCTTC---TATCGCGT 427
BSNT_00457 437 CTCAACAGGCGGTCAAAATGGCGGTTTTCGCTTTTGGCGCCGCTGGAACC 486
||||.|||||..|.||||||...|||||.||||||||||||||.|||||.
BL05020___ycb 428 CTCAGCAGGCTCTGAAAATGATCGTTTTTGCTTTTGGCGCCGCAGGAACG 477
BSNT_00457 487 AGTTTAGTTCCCATCTTTTTTGGGATGCGTAGACACTCGGTTCCGGCGAC 536
||||||||.||||||||||||||.|||.|.|...||||...|.||||.||
BL05020___ycb 478 AGTTTAGTACCCATCTTTTTTGGAATGAGAAAGTACTCCACTGCGGCAAC 527
BSNT_00457 537 CATCATTTCATCTGTAGTAATTGTGATGCTCATCAGCTCAACAAGTCCGG 586
.|||||.||||||||.|||||..|.||||..|||||.||.|||.|.||.|
BL05020___ycb 528 GATCATCTCATCTGTTGTAATCATCATGCCGATCAGTTCCACAGGCCCTG 577
BSNT_00457 587 GCTTCTCGATTTCATCTGTTGTGTATATCCCGTTATCGTTAGCGGCATTC 636
||||.||.|||||.||..||||||||||.||.|||||..|.||.|||.||
BL05020___ycb 578 GCTTTTCTATTTCTTCAATTGTGTATATACCTTTATCTCTTGCCGCAGTC 627
BSNT_00457 637 GGATTGTTCTTTTCCTACATGGCGATCAGGAATGCG----GAAAAGCAGG 682
||..||||.|||||||...||| |.|.||.||| |||||....|
BL05020___ycb 628 GGTCTGTTTTTTTCCTTTTTGG----CTGTAAGGCGTATTGAAAAAATAG 673
BSNT_00457 683 ATG---CGTAA 690
||| ..|||
BL05020___ycb 674 ATGTTTTTTAA 684
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