Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02781 and BL05012
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02781.1.5803.seq
# -bsequence dna-align/BL05012.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02781-BL05012.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02781-BL05012.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02781
# 2: BL05012
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity: 148/248 (59.7%)
# Similarity: 148/248 (59.7%)
# Gaps: 40/248 (16.1%)
# Score: 366.0
#
#
#=======================================
BSNT_02781 1 ATGAATTTCTA----CTTGCACCGTTCTTTGGAAAGCCAAATGCC----- 41
||||| || .|||.|.|||||..|||||..|...||.||
BL05012 1 ATGAA----TAAGCTGTTGTATCGTTCCATGGAAGACGGCATTCCGGTAG 46
BSNT_02781 42 -AATCAGCATTATATATATGAAGAAAGACGGAACGATTAGTAAAAGAACG 90
|||| |||||.|||||.|||..||| ..||..|||..|..||
BL05012 47 AAATC------ATATACATGAAAAAAAGCGG---TTTTTCTAAGCGGGCG 87
BSNT_02781 91 ATTATTGTGAGACAGAAAAGCAAAACG--AAAATCAAAGCATTTTGTTTT 138
|||.|||| ||.|||||...|||||| .|..|.|||||||||||.||.
BL05012 88 ATTCTTGT--GAAAGAAATAAAAAACGGTTATGTGAAAGCATTTTGCTTC 135
BSNT_02781 139 TCGAAACAACAGATCAGAACATTTTTATTGGACTCTATCCTCTCCTGTGA 188
...||||||||||||||||..|||..|.|.||.||.||..|.||| |||
BL05012 136 CAAAAACAACAGATCAGAATGTTTAAAATAGAGTCCATTTTGTCC-GTG- 183
BSNT_02781 189 TTTTGTGAGAACAAATAAGCAAAATC--TCTATTCTGCAGGCCGGTAA 234
||...|.|..|||.||| |||.|| .|.|||.||| .|||
BL05012 184 --TTCCCATATAAAAAAAG-AAATTCAGCCCATTATGC------TTAA 222
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