Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00245 and BL05011

See Amino acid alignment / Visit BSNT_00245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00245___rpmJ.1.5803.seq
#    -bsequence dna-align/BL05011___rpmJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00245___rpmJ-BL05011___rpmJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00245___rpmJ-BL05011___rpmJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00245___rpmJ
# 2: BL05011___rpmJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:     109/114 (95.6%)
# Similarity:   109/114 (95.6%)
# Gaps:           0/114 ( 0.0%)
# Score: 525.0
# 
#
#=======================================

BSNT_00245___      1 ATGAAAGTGAGACCATCAGTTAAACCAATCTGCGAAAAATGTAAAGTTAT     50
                     ||||||||||||||||||||||||||.|||||.||||||||.||.||.||
BL05011___rpm      1 ATGAAAGTGAGACCATCAGTTAAACCGATCTGTGAAAAATGCAAGGTCAT     50

BSNT_00245___     51 TCGCAGAAAAGGAAAAGTAATGGTGATCTGTGAAAATCCAAAGCATAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL05011___rpm     51 TCGCAGAAAAGGAAAAGTAATGGTGATCTGTGAAAATCCAAAGCATAAAC    100

BSNT_00245___    101 AAAAACAAGGATAA    114
                     ||||||||||||||
BL05011___rpm    101 AAAAACAAGGATAA    114


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