Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00243 and BL05010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00243.1.5803.seq
# -bsequence dna-align/BL05010.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00243-BL05010.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00243-BL05010.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00243
# 2: BL05010
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 336
# Identity: 178/336 (53.0%)
# Similarity: 178/336 (53.0%)
# Gaps: 138/336 (41.1%)
# Score: 699.0
#
#
#=======================================
BSNT_00243 1 ----------------GTGAACATTGG-----------------CAAG-- 15
.|||| ||||| ||||
BL05010 1 ATGTATCGGAAAACACCTGAA-ATTGGACAGTTCGTACGCATGACAAGAG 49
BSNT_00243 16 -------ACTGAATTCAT-CTTGCTGCTTGTCGTTGGAATTTTAACCATC 57
|.||||...|| | ||.| ||||..||| ||.|...|.|||
BL05010 50 GCCGCGAAATGAACCAATAC--GCAG-TTGTTATTG--ATATAGTCGATC 94
BSNT_00243 58 ATCA--ATGTACTAACAGCAGACGGAGAAAAGCGTACATTTCATTCTCCT 105
|||| ||||.||...||||||||||||||||||||.|||||||||||||
BL05010 95 ATCATCATGTGCTGGTAGCAGACGGAGAAAAGCGTAAATTTCATTCTCCT 144
BSNT_00243 106 AAGAAAAAGAATATCAATCATTTAACCCTTTATGATTGCGTATCTCCGGA 155
|||||||||||||||||||||||||||.||||||||||||||||||||||
BL05010 145 AAGAAAAAGAATATCAATCATTTAACCTTTTATGATTGCGTATCTCCGGA 194
BSNT_00243 156 AGTTCAGAACAGTATAAACGAAACAGGGCGTGTGACAAAC---------- 195
||||||||||||||||||||||||||||||||||||||||
BL05010 195 AGTTCAGAACAGTATAAACGAAACAGGGCGTGTGACAAACGGAAAATTGA 244
BSNT_00243 196 ------TTCTTTTGA----------------------------------- 204
.||||||||
BL05010 245 GATTTTCTCTTTTGAAATTTGTCAGAGAGCAAGTTACTGATTTGAAGAAG 294
BSNT_00243 204 ------------------------------------ 204
BL05010 295 GGAGAACACTTGAATGGCGAAAGACGATGTAATTGA 330
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