Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00211 and BL05009
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence dna-align/BSNT_00211___ybxF.1.5803.seq
# -bsequence dna-align/BL05009___ybxF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00211___ybxF-BL05009___ybxF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00211___ybxF-BL05009___ybxF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00211___ybxF
# 2: BL05009___ybxF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity: 204/251 (81.3%)
# Similarity: 204/251 (81.3%)
# Gaps: 4/251 ( 1.6%)
# Score: 827.0
#
#
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BSNT_00211___ 1 ATGTCTTATGATAAAGTATCACAGGCCAAATCAATTATTATTGGTACGAA 50
||||||||||||||||||||||||||..||||.||||||||.||||||||
BL05009___ybx 1 ATGTCTTATGATAAAGTATCACAGGCTCAATCTATTATTATCGGTACGAA 50
BSNT_00211___ 51 GCAAACAGTGAAAGCTCTAAAGCGAGGTTCAGTAAAGGAAGTAGTCGTTG 100
|||.|||||.|||||.||.|||||...|||.||.||||||||.|||||.|
BL05009___ybx 51 GCAGACAGTCAAAGCACTGAAGCGCAATTCTGTTAAGGAAGTCGTCGTAG 100
BSNT_00211___ 101 CAAAAGACGCAGATCCGATACTCACGTCAAGTGTTGTTTCA--CTTGCTG 148
||||.|||||.|||||....||.||||||.|||| |.||| ||.||..
BL05009___ybx 101 CAAAGGACGCTGATCCTTGTCTGACGTCAGGTGT--TATCAATCTGGCAA 148
BSNT_00211___ 149 AAGATCAAGGTATCTCTGTCTCAATGGTTGAATCCATGAAAAAGCTCGGC 198
|.||.|||||..|..|.||||||||||..||.||||||||||||||||||
BL05009___ybx 149 ATGAACAAGGGGTTCCAGTCTCAATGGCAGAGTCCATGAAAAAGCTCGGC 198
BSNT_00211___ 199 AAAGCCTGCGGAATTGAGGTAGGAGCAGCCGCTGTTGCCATTATTTTATA 248
|||||||||||||||||.||.|||||.||.|||||||||||||||..|||
BL05009___ybx 199 AAAGCCTGCGGAATTGAAGTCGGAGCTGCAGCTGTTGCCATTATTCAATA 248
BSNT_00211___ 249 A 249
|
BL05009___ybx 249 A 249
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