Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00199 and BL05006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00199___secE.1.5803.seq
# -bsequence dna-align/BL05006___secE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00199___secE-BL05006___secE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00199___secE-BL05006___secE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00199___secE
# 2: BL05006___secE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 149/181 (82.3%)
# Similarity: 149/181 (82.3%)
# Gaps: 2/181 ( 1.1%)
# Score: 605.0
#
#
#=======================================
BSNT_00199___ 1 ATGCGTATTATGAAATTCTTTAAAG-ATGTTGGGAAAGAAATGAAAAAGG 49
|||.|||||||.||||| ||||||| ||||.||.||||||||||||||||
BL05006___sec 1 ATGGGTATTATCAAATT-TTTAAAGAATGTCGGAAAAGAAATGAAAAAGG 49
BSNT_00199___ 50 TAAGCTGGCCTAAAGGAAAAGAGTTAACGCGTTATACCATTACGGTAATT 99
|.|.||||||||||||||||||..|||||||.|||||.||.||.||.||.
BL05006___sec 50 TCACCTGGCCTAAAGGAAAAGAACTAACGCGCTATACGATCACTGTTATC 99
BSNT_00199___ 100 TCAACAGTTATCTTTTTTGTTATCTTTTTTGCCCTCCTTGACACAGGAAT 149
.|.||.|||||||||||.|..|||||||||||.|||.|.||..|.||.||
BL05006___sec 100 ACCACCGTTATCTTTTTCGCCATCTTTTTTGCACTCATCGATTCGGGTAT 149
BSNT_00199___ 150 TTCTCAATTAATTCGTTTTATAGTTGAATAA 180
|.|.||||||||||||||.||||||||||||
BL05006___sec 150 TACGCAATTAATTCGTTTAATAGTTGAATAA 180
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