Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00199 and BL05006

See Amino acid alignment / Visit BSNT_00199 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_00199___secE.1.5803.seq
#    -bsequence dna-align/BL05006___secE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00199___secE-BL05006___secE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00199___secE-BL05006___secE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00199___secE
# 2: BL05006___secE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity:     149/181 (82.3%)
# Similarity:   149/181 (82.3%)
# Gaps:           2/181 ( 1.1%)
# Score: 605.0
# 
#
#=======================================

BSNT_00199___      1 ATGCGTATTATGAAATTCTTTAAAG-ATGTTGGGAAAGAAATGAAAAAGG     49
                     |||.|||||||.||||| ||||||| ||||.||.||||||||||||||||
BL05006___sec      1 ATGGGTATTATCAAATT-TTTAAAGAATGTCGGAAAAGAAATGAAAAAGG     49

BSNT_00199___     50 TAAGCTGGCCTAAAGGAAAAGAGTTAACGCGTTATACCATTACGGTAATT     99
                     |.|.||||||||||||||||||..|||||||.|||||.||.||.||.||.
BL05006___sec     50 TCACCTGGCCTAAAGGAAAAGAACTAACGCGCTATACGATCACTGTTATC     99

BSNT_00199___    100 TCAACAGTTATCTTTTTTGTTATCTTTTTTGCCCTCCTTGACACAGGAAT    149
                     .|.||.|||||||||||.|..|||||||||||.|||.|.||..|.||.||
BL05006___sec    100 ACCACCGTTATCTTTTTCGCCATCTTTTTTGCACTCATCGATTCGGGTAT    149

BSNT_00199___    150 TTCTCAATTAATTCGTTTTATAGTTGAATAA    180
                     |.|.||||||||||||||.||||||||||||
BL05006___sec    150 TACGCAATTAATTCGTTTAATAGTTGAATAA    180


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