Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00136 and BL05004

See Amino acid alignment / Visit BSNT_00136 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:49
# Commandline: needle
#    -asequence dna-align/BSNT_00136___folK.1.5803.seq
#    -bsequence dna-align/BL05004___folK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00136___folK-BL05004___folK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00136___folK-BL05004___folK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00136___folK
# 2: BL05004___folK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 527
# Identity:     387/527 (73.4%)
# Similarity:   387/527 (73.4%)
# Gaps:          49/527 ( 9.3%)
# Score: 1356.5
# 
#
#=======================================

BSNT_00136___      1 ATGAACAACATAGCTTATATTGCACTTGGATCTAATATTG------GAGA     44
                     ||||||||||..||.|||||.||.||.||.||.|||||.|      |.||
BL05004___fol      1 ATGAACAACACGGCATATATAGCGCTCGGCTCGAATATCGGCCGGCGGGA     50

BSNT_00136___     45 TAGAGAAACGTATTTAAGGCAAGCAGTGGCT-TCACTGCATCAGCA----     89
                        ||||   |||||||...||||.||..|| || ||.|||||.||    
BL05004___fol     51 ---AGAA---TATTTAAAAAAAGCTGTCTCTCTC-CTCCATCAACATCCG     93

BSNT_00136___     90 --TGCTGCGGTGACAGTCACTAAAGTGTCGTCTATTTACGAAACTGACCC    137
                       ||..|.||||||||.||      |.|||||.||||||||||||||.||
BL05004___fol     94 TCTGTAGAGGTGACAGACA------TCTCGTCAATTTACGAAACTGATCC    137

BSNT_00136___    138 GGTCGG--ATACGAAGATCAAGCTCAATTTTTGAATATGGCTGTTGAAAT    185
                     .|||||  ||||  |||.||||.||.||||||.||.|||||||..|...|
BL05004___fol    138 TGTCGGTTATAC--AGACCAAGATCTATTTTTAAACATGGCTGCAGCTGT    185

BSNT_00136___    186 CAAGACA--TCATTGAACCCTTTTGAACTCCTTGAACTGACGCAGCAGAT    233
                     .||.|||  ||.||.|  ||.||||||.|.||.||..||||.||||..||
BL05004___fol    186 TAAAACATCTCTTTCA--CCGTTTGAATTGCTCGATTTGACTCAGCGTAT    233

BSNT_00136___    234 AGAAAATGAATTAGGCAGAACAAGGGAAGTAAGATGGGGGCCGCGGACGG    283
                     .|||||.|||.|.|||.|.|.|.|.||..|.||||||||||||.||||.|
BL05004___fol    234 TGAAAAAGAACTCGGCCGCAAACGCGACATTAGATGGGGGCCGAGGACTG    283

BSNT_00136___    284 CAGACCTTGACATTTTGTTATTTAATCGTGAAAATATTGAATCAGAGCAA    333
                     |||||||||||||||||||.|.||||||||||||||||||..||||||||
BL05004___fol    284 CAGACCTTGACATTTTGTTGTATAATCGTGAAAATATTGAGACAGAGCAA    333

BSNT_00136___    334 CTAATTGTTCCGCATCCGAGAATGTATGAGCGTTTGTTTGTCCTTGCGCC    383
                     ||.||.|||||.|||||.||||||.||||.|||||||||||.||....||
BL05004___fol    334 CTTATCGTTCCTCATCCTAGAATGCATGAACGTTTGTTTGTACTCATCCC    383

BSNT_00136___    384 GCTTGC-GGAAATTTGCCAGCAGGTTGAAAAAGAG-GCT-ACAAGC--GC    428
                     || ||| |||.||||..|.|.|..|||    ||.| ||| .|||.|  ||
BL05004___fol    384 GC-TGCTGGAGATTTATCCGGATCTTG----AGGGAGCTGTCAATCATGC    428

BSNT_00136___    429 CGAAACAGACCAAGAAGGTGTAAGAGTATGGAAGCAGAAATCTGGGGTAG    478
                        ||.|.|.||||||||||||||||||||||||||||||||||||||||
BL05004___fol    429 ---AAAAAATCAAGAAGGTGTAAGAGTATGGAAGCAGAAATCTGGGGTAG    475

BSNT_00136___    479 ACGAATTCGTGCAT-TCAGAAAGCTGA    504
                     |||||||||||||| || |||||||||
BL05004___fol    476 ACGAATTCGTGCATATC-GAAAGCTGA    501


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