Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05653 and BL04033
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05653___ywkD.1.5803.seq
# -bsequence dna-align/BL04033___ywkD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05653___ywkD-BL04033___ywkD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05653___ywkD-BL04033___ywkD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05653___ywkD
# 2: BL04033___ywkD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 395
# Identity: 268/395 (67.8%)
# Similarity: 268/395 (67.8%)
# Gaps: 19/395 ( 4.8%)
# Score: 805.0
#
#
#=======================================
BSNT_05653___ 1 ATGTTGCTGAAATCCATACATCATATTGCAATCATATGTTCAGATTACGA 50
.|||||.||||.||.|||||.||.||.||||||||.||.|||||.||
BL04033___ywk 1 ---ATGCTGGAATCGATTCATCACATCGCCATCATATGCTCGGATTATGA 47
BSNT_05653___ 51 AAAGTCGAAAGCTTTCTACGTACATAAGCTTGGTTTTCAGGTGATTC--- 97
|...||.|||.|.|||||.||..|.|||||.||..|| |.|||||
BL04033___ywk 48 AGCATCCAAAACATTCTATGTCGACAAGCTCGGACTT---GAGATTCTGA 94
BSNT_05653___ 98 AAGAAACGTACCGCGAAGAGCGCGGCTCCTATAAGCTTGATTTGTCGCTT 147
..|||||||||.|..|.||.|..|..||.|||||.||.||..|.||..|.
BL04033___ywk 95 GCGAAACGTACAGAAAGGATCAGGAATCATATAAACTGGACCTCTCATTA 144
BSNT_05653___ 148 AACGGCTCG-TATGTCATTGAGCTGTTCTCGTTTCCCGATCCGCCCGAAC 196
|||||| || ||||||||.||.|||||.||.|||||.||||||||||.||
BL04033___ywk 145 AACGGC-CGCTATGTCATCGAACTGTTTTCTTTTCCGGATCCGCCCGCAC 193
BSNT_05653___ 197 GACAAACCCGGCCTGAAGCCGCAGGCCTGCGCCACCTCGCCTTTACAGTC 246
|.|..|||.|.||.|||||.||.||.||.|||||..|.||.||.||.||
BL04033___ywk 194 GCCTTACCAGACCCGAAGCTGCCGGACTCCGCCATTTGGCTTTCACGGT- 242
BSNT_05653___ 247 GGC--AGCTTGGATAAAGCGGTTCAA-GAGCTTCATG-AAAAAGGAATCG 292
||| |.||||...|.|.|| |||| |||| |||.| |||||||.|||.
BL04033___ywk 243 GGCCGATCTTGACCAGACCG--TCAAGGAGC-TCAAGCAAAAAGGCATCA 289
BSNT_05653___ 293 AAACAGAGCCAATCAGAACAGATCCGCTGACCGGCAAGCGTTTCACCTTC 342
...|.||.||.|||.|.||.|||||...|||.||||||||.|..||.|||
BL04033___ywk 290 CTGCTGAACCGATCCGCACCGATCCCGGGACGGGCAAGCGCTATACGTTC 339
BSNT_05653___ 343 TTTTTTGATCCTGACCAGCTTCCATTAGAACTGTATGAACAATAA 387
||.|..||.||.|||...||.||.|||||.||.||.|||..|||.
BL04033___ywk 340 TTCTCCGACCCGGACGGCCTGCCTTTAGAGCTTTACGAAGCATAG 384
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