Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05675 and BL04031
See
Amino acid alignment /
Visit
BSNT_05675 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence dna-align/BSNT_05675___ywjG.1.5803.seq
# -bsequence dna-align/BL04031___ywjG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05675___ywjG-BL04031___ywjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05675___ywjG-BL04031___ywjG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05675___ywjG
# 2: BL04031___ywjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 599
# Identity: 348/599 (58.1%)
# Similarity: 348/599 (58.1%)
# Gaps: 145/599 (24.2%)
# Score: 1017.0
#
#
#=======================================
BSNT_05675___ 1 ATGTTG---AAAATATTCACGACGCAGTTAACAGGTATTTTTTCCCGCAT 47
||| |||||.|||||.||.||.||.||.||.||.||...|||.||
BL04031___ywj 1 ---TTGCTTAAAATTTTCACCACTCAATTGACGGGAATCTTCAACCGGAT 47
BSNT_05675___ 48 TC---AGGATAAGG---AATCTGACGCGATTGAAGATGGGGCGCGGCTGC 91
|| |||...||| ||| ||||.||.||.||.||.||..||.
BL04031___ywj 48 TCAAGAGGGCGAGGCCCAAT------CGATAGAGGACGGCGCCCGCTTGT 91
BSNT_05675___ 92 TTGCTCAAGCGGTGATCAGCGGGCATTCCATTTATTTATACGGAGCGAAT 141
|.|||||.|||||.|||||.|..|||||..|||||.||||||||...|||
BL04031___ywj 92 TGGCTCAGGCGGTCATCAGTGATCATTCGGTTTATGTATACGGAAAAAAT 141
BSNT_05675___ 142 GAGCTTCAGGGCGTCTTTTTTGAGGCCACCGAAAGCAAA----------- 180
||..|..|.|||.|.|| ||||| ||
BL04031___ywj 142 GAATTGGAAGGCATTTT-------------GAAAG--AAGCGATGTACAG 176
BSNT_05675___ 181 ----GAACCCTTCCCATCTGTCAAAGCCTTTCCAGAAAGCGCTGAGGAAG 226
|||||.|||||.||.||| |||.|||||..||||
BL04031___ywj 177 TTCTGAACCGTTCCCCTCAGTC-------------AAACCGCTGCAGAAG 213
BSNT_05675___ 227 TGAC--AGAAAGC---------------------GACAGGGTGCTGATGT 253
||| |||||.| ||||..||||||||||
BL04031___ywj 214 -GACGAAGAAAACTGGCCCGATTTTGAAATGACGGACAAAGTGCTGATGT 262
BSNT_05675___ 254 TTT------GTTCAG-GGACGGGCACAGCCGAAGAAC------AGGCGCT 290
|.| |||||| ||| .|.|||||||| .||||
BL04031___ywj 263 TCTGCGCCGGTTCAGCGGA-------TGACGAAGAACTGAAAATGGCG-- 303
BSNT_05675___ 291 CGCAAAAGAGCTTTATGAAAAAGGTGCGGGAGTCGTATG-CGTATCGCCC 339
|.|||| ||.|||||||||||....|||.|.|| || |||.||.||
BL04031___ywj 304 -GAAAAA---CTGTATGAAAAAGGAATCGGACTTGT-TGTCGTCTCCCC- 347
BSNT_05675___ 340 GCAGCCAAAGACAGTGCGGGAATAGA----------ACAGTATTGT---- 375
|.||||||.||| |..|.||..|
BL04031___ywj 348 --------------TTCGGGAAAAGACGGCGTCCCGATCGCATCCTTCGC 383
BSNT_05675___ 376 -GATGTGCATATTGATTCTAAATTAAAAATGCCGCTTGTTCCCGATGAAG 424
|||||.|||||.|||||.||..|.|.||||||||||.||||||||||||
BL04031___ywj 384 CGATGTCCATATCGATTCAAAGCTGAGAATGCCGCTTCTTCCCGATGAAG 433
BSNT_05675___ 425 ACGGCACCCGTTACGGGTTTCCCTCTTTAAT-GACAGCACTGTATGTCTA 473
||||.||..|.|||||.|||||.||..|.|| |.|||| ||.|||.|.||
BL04031___ywj 434 ACGGAACAAGGTACGGATTTCCGTCCCTGATGGTCAGC-CTCTATATTTA 482
BSNT_05675___ 474 TCACGCTTTATCGTTTACACTAAAAGAAATTCTGCAAGAGTATGCATAA 522
|||.||..||||.||||||.||||.|||||.||.||.||.||...||||
BL04031___ywj 483 TCATGCCCTATCCTTTACATTAAAGGAAATCCTCCAGGAATACCAATAA 531
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.