Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04700 and BL04025
See
Amino acid alignment /
Visit
BSNT_04700 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:52
# Commandline: needle
# -asequence dna-align/BSNT_04700.1.5803.seq
# -bsequence dna-align/BL04025.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04700-BL04025.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04700-BL04025.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04700
# 2: BL04025
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity: 148/244 (60.7%)
# Similarity: 148/244 (60.7%)
# Gaps: 53/244 (21.7%)
# Score: 431.0
#
#
#=======================================
BSNT_04700 1 ATGGCAAATCCTTTTGAAAATGCGGATGGCACATATTTGGTGCTGGTCAA 50
|||.||||||||||||||||||...|.|||||||||.|.|| .|.||
BL04025 1 ATGACAAATCCTTTTGAAAATGAACACGGCACATATGTCGT----TTTAA 46
BSNT_04700 51 TGAA----GAAGGCCAATATTCCCTATGGCCGGGTTTTATAGATGTGCCG 96
|||| ||.|||||.|||||.||.|||||||..||.||..||.|.|||
BL04025 47 TGAATCAGGATGGCCAGTATTCACTCTGGCCGGCCTTCATTCATATTCCG 96
BSNT_04700 97 AGC-GGCTGGACAGTCGT-TCATGAGCAAAAAGGGCGTGAA--------- 135
|| ||.|||...||||| | || ||| |||
BL04025 97 -GCAGGGTGGGAGGTCGTCT-----GC-----GGG---GAAGCGAGCCGC 132
BSNT_04700 136 ---GCTTGTTTGGACTATATCCAATCGCATTGGAGCGATATGAGGCCAAA 182
||.|||.|.|||||||||...|||.||||||.||||.|...|||.||
BL04025 133 AGCGCCTGTATCGACTATATCAGCTCGAATTGGACCGATCTCTCGCCGAA 182
BSNT_04700 183 CAGCCTAAAGGCT-GTTGAAAATGT--------GTAA------- 210
||||.|.|| ||| ||||.|.|.|| ||.|
BL04025 183 CAGCATCAA-GCTGGTTGCAGAAGTACACGGCGGTCAGCAATGA 225
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.