Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04710 and BL04020

See Amino acid alignment / Visit BSNT_04710 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:57
# Commandline: needle
#    -asequence dna-align/BSNT_04710___dhbA.1.5803.seq
#    -bsequence dna-align/BL04020___dhbA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04710___dhbA-BL04020___dhbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04710___dhbA-BL04020___dhbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04710___dhbA
# 2: BL04020___dhbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 832
# Identity:     548/832 (65.9%)
# Similarity:   548/832 (65.9%)
# Gaps:         107/832 (12.9%)
# Score: 1761.5
# 
#
#=======================================

BSNT_04710___      1 ATGAATGCAAAGAGTATAGAGGGAAA---AA--TTGCTTTTATAACAGGG     45
                                         |.||||   ||  |||||||..|.||.|||
BL04020___dhb      1 --------------------GTGAAAGGCAAGGTTGCTTTGGTGACTGGG     30

BSNT_04710___     46 GCTGCCCAAGGAATAGGCGAAGCTGTTGCGCGGACGCTTGCCAGTCAAGG     95
                     |||.|.||||||||.|||.|||..||.||.|.|.|||||||..|.|..||
BL04020___dhb     31 GCTTCGCAAGGAATCGGCAAAGAAGTGGCCCTGGCGCTTGCTGGACGCGG     80

BSNT_04710___     96 CGCACATATTGCGGCAGTTGATTATAATCCTGAAAA-----GCTGGAAAA    140
                     .|....|.||||.||.|.||||.|.||||  |||||     |||.|||  
BL04020___dhb     81 GGTGTTTGTTGCAGCGGCTGATCAAAATC--GAAAAGGGCTGCTTGAA--    126

BSNT_04710___    141 GGTTG----------TGAGCAGCCTCAAAGCAGAAGGCCGCCATGCAG--    178
                      .|||          |||.||          |.||||.|    |||||  
BL04020___dhb    127 -CTTGAAGACGAACTTGAACA----------AAAAGGAC----TGCAGGG    161

BSNT_04710___    179 --AAGCTTTTCCTGCGGATGTGAGAGACAGCGCGGCGATTGACGAGATCA    226
                       .||.||||.|.|||||||||.|.|||||.||.||..|||||.||.|.|
BL04020___dhb    162 TTCAGGTTTTGCCGCGGATGTGGGCGACAGTGCCGCAGTTGACCAGCTTA    211

BSNT_04710___    227 -CGGCGCGCATCGAACGTGAAATGGGGCCGATTGATATTTTAGTGAATGT    275
                      ||.|| ..||.|||||.||.||.||.|||||.||.||..|.||.|||||
BL04020___dhb    212 TCGCCG-ATATTGAACGCGAGATCGGTCCGATAGACATGCTTGTCAATGT    260

BSNT_04710___    276 AGCGGGTGTCCTTCGCCCGGGACTGATCCATTCGCTTAGCGATGAGGAAT    325
                     |||.||.||.||..|..||||.||||||||||||.|.||.|||||.||.|
BL04020___dhb    261 AGCCGGCGTGCTCAGAACGGGTCTGATCCATTCGTTGAGTGATGAAGATT    310

BSNT_04710___    326 GGGAGGCGACGTTCTCAGTGAATTCGACTGGCGTATTTAACGCCTCGCGT    375
                     |||||..|||||||...||.||.||.||.||.||.|||||||..||||||
BL04020___dhb    311 GGGAGAAGACGTTCAATGTCAACTCCACCGGGGTTTTTAACGTATCGCGT    360

BSNT_04710___    376 TCAGT---CAGCAAATATATGATGG-ACCG---AAGATCAGGTTCGATTG    418
                     .|.||   |.||      ..||||| ||||   |.|| |.||..||||.|
BL04020___dhb    361 GCCGTCGCCCGC------CGGATGGTACCGCGCAGGA-CTGGAGCGATCG    403

BSNT_04710___    419 TAACAGTCGGATCGAATGCTGCCGGTGTGCC----AAGAACATCTATGGC    464
                     |.||.||||||||.|||||.||.|.||||||    |.|.||    |||||
BL04020___dhb    404 TGACTGTCGGATCAAATGCGGCAGCTGTGCCGCGGATGCAC----ATGGC    449

BSNT_04710___    465 GGCATATGCGTCTTCAAAGGCTGCGGCTGTGATGTTTACGAAATGCCTTG    514
                     .||.||.|||.|.||.|||||.||.|||.|.|||||||||||||||||.|
BL04020___dhb    450 CGCCTACGCGGCCTCCAAGGCGGCCGCTTTAATGTTTACGAAATGCCTCG    499

BSNT_04710___    515 GCCTTGAGCTTGCAGAATACAATATTCGCTGCAACATTGTATCTCCCGGA    564
                     |||||||.|||||.||.||||||||.||||||||.||..||||.||||||
BL04020___dhb    500 GCCTTGAACTTGCCGAGTACAATATCCGCTGCAATATCATATCGCCCGGA    549

BSNT_04710___    565 TCAACGGAAACTGACATGCAGTGGTCATTATGGGCCGAC-----GAGAAT    609
                     ||||||||.||....||||||.||||..|||||     |     |||   
BL04020___dhb    550 TCAACGGATACCCCGATGCAGCGGTCGCTATGG-----CAGTGTGAG---    591

BSNT_04710___    610 GGAGCGGAGCAA---GTCATAAAAGGATCACTTGAGACATTTAAAACAGG    656
                     |.|||.|.||||   |||||..|||||||||||||.|||||.|||||.||
BL04020___dhb    592 GAAGCTGCGCAAGGCGTCATTGAAGGATCACTTGAAACATTCAAAACGGG    641

BSNT_04710___    657 GATCCCGCTCAAAAAACTAGCCAAGCCTTCGGATATTGCGGATGCGGTGC    706
                     .|||||||||..||||.|.||...|||..|.||.|||||.|||||.||..
BL04020___dhb    642 AATCCCGCTCGGAAAATTGGCTTCGCCGGCTGACATTGCAGATGCTGTAG    691

BSNT_04710___    707 TCTTTTTGGTTTCTGGCCAGGCAGGGCATATTACGATGCATAATTTATGC    756
                     |.||||||.|.||||.|..|||..|.||||||||||||||..||||..||
BL04020___dhb    692 TATTTTTGCTGTCTGACGGGGCTCGTCATATTACGATGCACGATTTGCGC    741

BSNT_04710___    757 GTAGATGGCGGCGCGAC-CTTAG-GCGTGTAA    786
                     ||.||||||||.||.|| |||.| ||.||.  
BL04020___dhb    742 GTCGATGGCGGAGCAACGCTTGGAGCCTGA--    771


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04710 and BL04020

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
