Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00309 and BL04018
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00309.1.5803.seq
# -bsequence dna-align/BL04018___feuC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00309-BL04018___feuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00309-BL04018___feuC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00309
# 2: BL04018___feuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1062
# Identity: 726/1062 (68.4%)
# Similarity: 726/1062 (68.4%)
# Gaps: 93/1062 ( 8.8%)
# Score: 2357.0
#
#
#=======================================
BSNT_00309 1 ATGGCTAAAAA------------ATATGC-------ATTGTTCAGCGCTT 31
.||.||||||| .||||| |||||.|
BL04018___feu 1 GTGCCTAAAAAGGTTGCAGTCATCTATGCTGTTTTTATTGTGC------- 43
BSNT_00309 32 TGATTCT-------TGTTGTCAGCTATTTCAGCTTAACGAG-CGGATCAT 73
||||||| ||| |||.|||||.|||| || .|||||.|
BL04018___feu 44 TGATTCTCACAATCTGT-------TATCTCAGCATAAC-AGTAGGATCGT 85
BSNT_00309 74 TTTCTGTTCGTCCTGCTGAGCTGCTCTCCACTCTTTTTCAAATCGACCCG 123
||.|.||.|.|||.|||||||||.|.||.||..|..||||.|||.|||||
BL04018___feu 86 TTGCCGTACATCCGGCTGAGCTGTTATCAACATTGCTTCACATCAACCCG 135
BSNT_00309 124 AATCCACAGTATGAAATTTTGCTGTTCGATTTAAGACTGCCGCGGGTTGT 173
|||...||.||.|..|||.|.|||||.||..|..|.||.||..||.||||
BL04018___feu 136 AATGAGCAATACGCCATTCTCCTGTTTGAGCTGCGTCTTCCAAGGATTGT 185
BSNT_00309 174 CATGGCTGCTATTATTGGACTCGGTCTTGGCATTGCAGGCGCTGTTATCC 223
.|.|||.||..|..|.||.||.||.||.||||||||.||..|.||.||||
BL04018___feu 186 GACGGCGGCACTCGTGGGTCTTGGGCTCGGCATTGCCGGTTCCGTCATCC 235
BSNT_00309 224 AGGCCATCACGAGAAACGGGCTTGCTGATCCTGGAATTCTCGGAATCAAC 273
||||.||.||.||.|||||.||.||.||.||.|||||.||.||.||.||.
BL04018___feu 236 AGGCGATGACAAGGAACGGACTGGCCGACCCGGGAATCCTGGGGATTAAT 285
BSNT_00309 274 GCAGGGGCAGGAGCCGGC-ATTGTAGCGTTTATGCTCTTATTCCAAGGCC 322
|||||.|| ||.|.|||| ||.||.|..|..|||||..|.||.|||||||
BL04018___feu 286 GCAGGTGC-GGGGGCGGCGATCGTCGGCTACATGCTGATCTTTCAAGGCC 334
BSNT_00309 323 AGAAGGAAGTGACATCCATAGCT-GCAGCGATGGGAATGCCGCTCTTTGG 371
|||..|||..||||..|.| ||| ||.||.|||||.|||||..||||.||
BL04018___feu 335 AGACCGAAACGACAAGCCT-GCTCGCTGCAATGGGGATGCCATTCTTCGG 383
BSNT_00309 372 ATTGATAGGCGGGC-TCATCGCGGCGATCCTGATTTACATATTTGCATGG 420
.|||||.|| |||| |..|.||.||.||..|.||||..||.|||||.|||
BL04018___feu 384 CTTGATCGG-GGGCATTTTGGCTGCAATATTCATTTTTATCTTTGCCTGG 432
BSNT_00309 421 CACAGAGGCAATTTAGATTCACGAAGAATTATTCTGGTAGGGATTGCGAT 470
|||...|||||.||.|||||..|.||.||||||||.||.||.||.|||||
BL04018___feu 433 CACGCCGGCAACTTGGATTCGGGCAGGATTATTCTCGTTGGAATCGCGAT 482
BSNT_00309 471 CAATTCAGGATTCAGCGCCCTGTCTTTGTTTT---TATCTTTAAAAATGG 517
.||||||||.||||||| |||| ||.|.||| |.||.||.||.|||.
BL04018___feu 483 TAATTCAGGGTTCAGCG--CTGT-TTCGCTTTACCTGTCATTGAAGATGA 529
BSNT_00309 518 ACCCGCAAGACTATCAAATGGCCATGGTGTGGAAAAACGGAAGCATCTGG 567
|.|||.|.|||.|..|||||||||||||.|||||||||||||||||||||
BL04018___feu 530 ATCCGAATGACCACGAAATGGCCATGGTTTGGAAAAACGGAAGCATCTGG 579
BSNT_00309 568 TCTGCCAACTGGACGTATA-TCACAGCCGTTCTCCCATGGATGCTGCTGT 616
||.||.||.|||||||||| ||| |||.|..||.||.|||.|||| |||
BL04018___feu 580 TCGGCGAATTGGACGTATATTCA-AGCGGCACTGCCGTGGCTGCT--TGT 626
BSNT_00309 617 --TTATACCGATTCTTATCGGC-----AAATCCCGCCTGCTCGACACCAT 659
||||.||..|||| || ||.|||.||||||||||.|||||
BL04018___feu 627 TCTTATTCCATTTCT-----GCTGATGAAGTCCGGCCTGCTCGATACCAT 671
BSNT_00309 660 TCGTTTTGATGAAGACACAGTCAGAAGCCTCGGCATTTCATCAAATAAAG 709
|||.|||.|||||||.||.||.|..||.||||||.|.||..|.||||..|
BL04018___feu 672 TCGCTTTCATGAAGATACGGTGAAGAGTCTCGGCGTATCCGCGAATATTG 721
BSNT_00309 710 AAAAAACCATCCTGCTCGTAGCCTGTGTAGCAATCATCAGCGCCTGTGTC 759
||||.....|.||||||...||.|||||.|..||.||||||||||||||.
BL04018___feu 722 AAAAGGTGGTGCTGCTCACGGCTTGTGTCGGCATTATCAGCGCCTGTGTG 771
BSNT_00309 760 TCCGTAGCGGGAAGCATGGCGTTTGTCGGCTTAATTGCTCCCCATATCTC 809
.|..|..||||.||||||||.|||||||||.|.||||||||.||.|||||
BL04018___feu 772 GCTATTTCGGGGAGCATGGCATTTGTCGGCCTGATTGCTCCGCACATCTC 821
BSNT_00309 810 ACGGAGACTGGCTGGCGTCGAACATCGCTATATCCTGCCACTG------A 853
.|||||.||.||.||||||...||.|||.| || ||.|| |
BL04018___feu 822 GCGGAGGCTCGCCGGCGTCCTGCACCGCCA----CT--CATTGCTGTTAA 865
BSNT_00309 854 GCGGTTTAATCGGGATGCTTCTTGTGATAAGCGCAGACTTTGCCGGAAAA 903
||||.||.|||||||||.||||.||..|..||||.||.|||||||||||.
BL04018___feu 866 GCGGATTGATCGGGATGTTTCTCGTATTGTGCGCCGATTTTGCCGGAAAG 915
BSNT_00309 904 CTGTTTTTTCAGCCCGCAGAAGTGCCCGCAGGCATCATTTTGGCGATCCT 953
|||.|.||.|||||..|.||.|||||.||.||.||||||.|.||.||..|
BL04018___feu 916 CTGCTGTTCCAGCCGTCCGAGGTGCCTGCGGGTATCATTCTCGCCATTTT 965
BSNT_00309 954 CGGAGTTCCTTATTTCTTATATCTGCTTTTCAAGCAAAAAAAGGGGGAGA 1003
|||.||.||.||.|||||||.|.|.||||||||.||||||| |||
BL04018___feu 966 CGGTGTGCCGTACTTCTTATTTTTACTTTTCAAACAAAAAA------AGA 1009
BSNT_00309 1004 ATGCTTGA---- 1011
.|| ||.|
BL04018___feu 1010 CTG-TTCATTAG 1020
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