Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00310 and BL04017

See Amino acid alignment / Visit BSNT_00310 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence dna-align/BSNT_00310___feuB.1.5803.seq
#    -bsequence dna-align/BL04017___feuB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00310___feuB-BL04017___feuB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00310___feuB-BL04017___feuB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00310___feuB
# 2: BL04017___feuB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1013
# Identity:     758/1013 (74.8%)
# Similarity:   758/1013 (74.8%)
# Gaps:          16/1013 ( 1.6%)
# Score: 2731.0
# 
#
#=======================================

BSNT_00310___      1 ATGTATTCAAAACAGTGGACACGTATCATATTGATTACTTCTCCATTTGC     50
                     |||.|||||||.||...|||.||.|||||..||||..|..||||.|||||
BL04017___feu      1 ATGCATTCAAAGCAAATGACCCGCATCATTATGATCGCCGCTCCGTTTGC     50

BSNT_00310___     51 TATAGCGCTGTCACTTTTGCTTTCAATCCTTTATGGGGCAAAGCATCTT-     99
                     .|||..||||||..||||.||.||..|...|||.||.|||||.||.||| 
BL04017___feu     51 CATACTGCTGTCTGTTTTTCTGTCGGTATGTTACGGTGCAAAACAGCTTG    100

BSNT_00310___    100 AGCACAGATATTGTTTTTACATCTCTTATTCATTTCGATCCGGGAAACAC    149
                     ||| |.||..|..|||||.|..|.||..|.|||||.|||||.||.|||||
BL04017___feu    101 AGC-CCGAGGTGATTTTTTCGGCGCTGCTGCATTTTGATCCAGGCAACAC    149

BSNT_00310___    150 AGACCATCAAATTATATGGCACTCCCGGATTCCAAGGGCTGCCGGCGCTC    199
                     |||.||||||||.||.|||||.|||||..||||..|.||||.||||||||
BL04017___feu    150 AGATCATCAAATCATTTGGCATTCCCGTCTTCCGCGCGCTGTCGGCGCTC    199

BSNT_00310___    200 TGCTCATAGGGGCAGCCCTTGCTGTTTCTGGAGCGCTTATGCAGGGCATC    249
                     |..|.||.||.||.||.||.||.||.||.||.||||||||||||||..||
BL04017___feu    200 TTTTAATCGGAGCGGCGCTGGCGGTGTCCGGTGCGCTTATGCAGGGTGTC    249

BSNT_00310___    250 ACGCGCAATTATTTAGCTTCGCCATCCATTATGGGTGTTTCAGATGGTTC    299
                     ||.||.|||||.||.|||||.||.||.||||||||.|||||.||.||.||
BL04017___feu    250 ACCCGAAATTACTTGGCTTCCCCGTCGATTATGGGCGTTTCCGACGGGTC    299

BSNT_00310___    300 AGCGTTTATCATTACGCT-TTGCATGGTTCTGCTCCCGCAATCATCTTCG    348
                     |||||||.|.||.||||| ||| |||||..||.|.|||...|||||.||.
BL04017___feu    300 AGCGTTTGTGATCACGCTGTTG-ATGGTGGTGATTCCGGGTTCATCCTCT    348

BSNT_00310___    349 ATTGAAATGATGATATACTCTTTTATCGGCTCAGCGTTAGGAGCTGTGTT    398
                     .|.||.||||||...||.||.||||||||.|||||..|.||.||.|...|
BL04017___feu    349 CTGGAGATGATGGGCTATTCGTTTATCGGATCAGCCGTCGGCGCCGGCCT    398

BSNT_00310___    399 AGTATTCGGCCTTGCCGCCATGATGCCAAACGGATTTACCCCCGTGCAGC    448
                     .||.||||||||.|||.|..||||.||||||||.||||..||.||.||.|
BL04017___feu    399 TGTCTTCGGCCTCGCCTCGGTGATTCCAAACGGTTTTATGCCGGTTCAAC    448

BSNT_00310___    449 TCGCCATCATCGGCACAGTCACAAGCATGCTGCTCAGCAGCTTATCAGCG    498
                     |.|||||.|||||.||.||.||||||||||||||||||||..|.||.|||
BL04017___feu    449 TTGCCATAATCGGGACGGTAACAAGCATGCTGCTCAGCAGTCTGTCTGCG    498

BSNT_00310___    499 GCCATGTCGATTTATTTTCAAATTTCTCAGGATCTCAGTTTCTGGTACAG    548
                     ||.||.||||||||.|||||||||||.|||||..||||.|||||||||||
BL04017___feu    499 GCGATATCGATTTACTTTCAAATTTCCCAGGACGTCAGCTTCTGGTACAG    548

BSNT_00310___    549 TGCCAGACTTCATCAAATGAGTCCGGATTTCCTGAAGCTTGCCGCTCCGT    598
                     .||.||.||.||||||.|||.|||.||..|.||||||..|||||..||||
BL04017___feu    549 CGCGAGGCTGCATCAATTGAATCCCGAGCTGCTGAAGTATGCCGTGCCGT    598

BSNT_00310___    599 TTTTCCTGATTGGCATCATAATGGCCATTTCTCTCAGCAAAAAGGTAACC    648
                     ||||..||||.||||||||..||||..|.||||||||||||||.||.||.
BL04017___feu    599 TTTTTGTGATCGGCATCATTCTGGCGCTCTCTCTCAGCAAAAAAGTGACA    648

BSNT_00310___    649 GCTGTATCATTAGGGGACGACATTTCTAAAAGCCTGGGGCAAAAGAAAAA    698
                     |||.|||||||.||.||.||||||||..|||||||.||.|   |||||||
BL04017___feu    649 GCTTTATCATTGGGCGATGACATTTCCGAAAGCCTCGGCC---AGAAAAA    695

BSNT_00310___    699 --AACCATTAAAAT---CATGGCGATGCTTTCCGTCATCATTTTAACCGG    743
                       |..|..|.||||   ||  ||||||....|.|||.||.||.|.||.||
BL04017___feu    696 GCAGGCCGTCAAATGGACA--GCGATGGCAGCGGTCGTCGTTCTGACAGG    743

BSNT_00310___    744 CAGTGCCGTAGCGCTGGCCGGAAAAATTGCGTTTGTCGGGTTGGTTGTTC    793
                     |.|..|.||.||..||||.|||||||||||.||||||||..||||.||.|
BL04017___feu    744 CTGCTCTGTCGCCATGGCGGGAAAAATTGCTTTTGTCGGACTGGTCGTGC    793

BSNT_00310___    794 CGCATATCACGAGATTTCTCGTCGGCTCTGATTACAGCAGGCTGATTCCG    843
                     |||||||.|||.|.|||||||||||.||.|||||||||.|||||||.|||
BL04017___feu    794 CGCATATTACGCGTTTTCTCGTCGGATCGGATTACAGCCGGCTGATCCCG    843

BSNT_00310___    844 TGCTCCTGTCTTTTGGGCGGAATCTTTTTAACCCTGTGTGATC-TCGCAA    892
                     ||||||||..||.|.|||||..|.|||||.||.|||...|||| ||.| |
BL04017___feu    844 TGCTCCTGCGTTCTCGGCGGCGTTTTTTTGACGCTGGCCGATCTTCTC-A    892

BSNT_00310___    893 GCAGATTTATCAACTATCCGTTTGAAACACCGATTGAGGTCGTAACATCC    942
                     ||.|..|.|||||||||||||||||.|||||||||||.|||||.||.||.
BL04017___feu    893 GCCGGCTGATCAACTATCCGTTTGAGACACCGATTGAAGTCGTTACTTCG    942

BSNT_00310___    943 ATTATCGGCGTACCTTTCTTCCTTTATTTAATTAAACGAAAAGGAGGGGA    992
                     .|.||||||||.|||||||||||||||||.||.||..|||||||||||||
BL04017___feu    943 GTGATCGGCGTTCCTTTCTTCCTTTATTTGATCAAGAGAAAAGGAGGGGA    992

BSNT_00310___    993 GCAAAATGGCTAA   1005
                     |||...||.||||
BL04017___feu    993 GCAGCGTGCCTAA   1005


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