Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00310 and BL04017
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00310___feuB.1.5803.seq
# -bsequence dna-align/BL04017___feuB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00310___feuB-BL04017___feuB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00310___feuB-BL04017___feuB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00310___feuB
# 2: BL04017___feuB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1013
# Identity: 758/1013 (74.8%)
# Similarity: 758/1013 (74.8%)
# Gaps: 16/1013 ( 1.6%)
# Score: 2731.0
#
#
#=======================================
BSNT_00310___ 1 ATGTATTCAAAACAGTGGACACGTATCATATTGATTACTTCTCCATTTGC 50
|||.|||||||.||...|||.||.|||||..||||..|..||||.|||||
BL04017___feu 1 ATGCATTCAAAGCAAATGACCCGCATCATTATGATCGCCGCTCCGTTTGC 50
BSNT_00310___ 51 TATAGCGCTGTCACTTTTGCTTTCAATCCTTTATGGGGCAAAGCATCTT- 99
.|||..||||||..||||.||.||..|...|||.||.|||||.||.|||
BL04017___feu 51 CATACTGCTGTCTGTTTTTCTGTCGGTATGTTACGGTGCAAAACAGCTTG 100
BSNT_00310___ 100 AGCACAGATATTGTTTTTACATCTCTTATTCATTTCGATCCGGGAAACAC 149
||| |.||..|..|||||.|..|.||..|.|||||.|||||.||.|||||
BL04017___feu 101 AGC-CCGAGGTGATTTTTTCGGCGCTGCTGCATTTTGATCCAGGCAACAC 149
BSNT_00310___ 150 AGACCATCAAATTATATGGCACTCCCGGATTCCAAGGGCTGCCGGCGCTC 199
|||.||||||||.||.|||||.|||||..||||..|.||||.||||||||
BL04017___feu 150 AGATCATCAAATCATTTGGCATTCCCGTCTTCCGCGCGCTGTCGGCGCTC 199
BSNT_00310___ 200 TGCTCATAGGGGCAGCCCTTGCTGTTTCTGGAGCGCTTATGCAGGGCATC 249
|..|.||.||.||.||.||.||.||.||.||.||||||||||||||..||
BL04017___feu 200 TTTTAATCGGAGCGGCGCTGGCGGTGTCCGGTGCGCTTATGCAGGGTGTC 249
BSNT_00310___ 250 ACGCGCAATTATTTAGCTTCGCCATCCATTATGGGTGTTTCAGATGGTTC 299
||.||.|||||.||.|||||.||.||.||||||||.|||||.||.||.||
BL04017___feu 250 ACCCGAAATTACTTGGCTTCCCCGTCGATTATGGGCGTTTCCGACGGGTC 299
BSNT_00310___ 300 AGCGTTTATCATTACGCT-TTGCATGGTTCTGCTCCCGCAATCATCTTCG 348
|||||||.|.||.||||| ||| |||||..||.|.|||...|||||.||.
BL04017___feu 300 AGCGTTTGTGATCACGCTGTTG-ATGGTGGTGATTCCGGGTTCATCCTCT 348
BSNT_00310___ 349 ATTGAAATGATGATATACTCTTTTATCGGCTCAGCGTTAGGAGCTGTGTT 398
.|.||.||||||...||.||.||||||||.|||||..|.||.||.|...|
BL04017___feu 349 CTGGAGATGATGGGCTATTCGTTTATCGGATCAGCCGTCGGCGCCGGCCT 398
BSNT_00310___ 399 AGTATTCGGCCTTGCCGCCATGATGCCAAACGGATTTACCCCCGTGCAGC 448
.||.||||||||.|||.|..||||.||||||||.||||..||.||.||.|
BL04017___feu 399 TGTCTTCGGCCTCGCCTCGGTGATTCCAAACGGTTTTATGCCGGTTCAAC 448
BSNT_00310___ 449 TCGCCATCATCGGCACAGTCACAAGCATGCTGCTCAGCAGCTTATCAGCG 498
|.|||||.|||||.||.||.||||||||||||||||||||..|.||.|||
BL04017___feu 449 TTGCCATAATCGGGACGGTAACAAGCATGCTGCTCAGCAGTCTGTCTGCG 498
BSNT_00310___ 499 GCCATGTCGATTTATTTTCAAATTTCTCAGGATCTCAGTTTCTGGTACAG 548
||.||.||||||||.|||||||||||.|||||..||||.|||||||||||
BL04017___feu 499 GCGATATCGATTTACTTTCAAATTTCCCAGGACGTCAGCTTCTGGTACAG 548
BSNT_00310___ 549 TGCCAGACTTCATCAAATGAGTCCGGATTTCCTGAAGCTTGCCGCTCCGT 598
.||.||.||.||||||.|||.|||.||..|.||||||..|||||..||||
BL04017___feu 549 CGCGAGGCTGCATCAATTGAATCCCGAGCTGCTGAAGTATGCCGTGCCGT 598
BSNT_00310___ 599 TTTTCCTGATTGGCATCATAATGGCCATTTCTCTCAGCAAAAAGGTAACC 648
||||..||||.||||||||..||||..|.||||||||||||||.||.||.
BL04017___feu 599 TTTTTGTGATCGGCATCATTCTGGCGCTCTCTCTCAGCAAAAAAGTGACA 648
BSNT_00310___ 649 GCTGTATCATTAGGGGACGACATTTCTAAAAGCCTGGGGCAAAAGAAAAA 698
|||.|||||||.||.||.||||||||..|||||||.||.| |||||||
BL04017___feu 649 GCTTTATCATTGGGCGATGACATTTCCGAAAGCCTCGGCC---AGAAAAA 695
BSNT_00310___ 699 --AACCATTAAAAT---CATGGCGATGCTTTCCGTCATCATTTTAACCGG 743
|..|..|.|||| || ||||||....|.|||.||.||.|.||.||
BL04017___feu 696 GCAGGCCGTCAAATGGACA--GCGATGGCAGCGGTCGTCGTTCTGACAGG 743
BSNT_00310___ 744 CAGTGCCGTAGCGCTGGCCGGAAAAATTGCGTTTGTCGGGTTGGTTGTTC 793
|.|..|.||.||..||||.|||||||||||.||||||||..||||.||.|
BL04017___feu 744 CTGCTCTGTCGCCATGGCGGGAAAAATTGCTTTTGTCGGACTGGTCGTGC 793
BSNT_00310___ 794 CGCATATCACGAGATTTCTCGTCGGCTCTGATTACAGCAGGCTGATTCCG 843
|||||||.|||.|.|||||||||||.||.|||||||||.|||||||.|||
BL04017___feu 794 CGCATATTACGCGTTTTCTCGTCGGATCGGATTACAGCCGGCTGATCCCG 843
BSNT_00310___ 844 TGCTCCTGTCTTTTGGGCGGAATCTTTTTAACCCTGTGTGATC-TCGCAA 892
||||||||..||.|.|||||..|.|||||.||.|||...|||| ||.| |
BL04017___feu 844 TGCTCCTGCGTTCTCGGCGGCGTTTTTTTGACGCTGGCCGATCTTCTC-A 892
BSNT_00310___ 893 GCAGATTTATCAACTATCCGTTTGAAACACCGATTGAGGTCGTAACATCC 942
||.|..|.|||||||||||||||||.|||||||||||.|||||.||.||.
BL04017___feu 893 GCCGGCTGATCAACTATCCGTTTGAGACACCGATTGAAGTCGTTACTTCG 942
BSNT_00310___ 943 ATTATCGGCGTACCTTTCTTCCTTTATTTAATTAAACGAAAAGGAGGGGA 992
.|.||||||||.|||||||||||||||||.||.||..|||||||||||||
BL04017___feu 943 GTGATCGGCGTTCCTTTCTTCCTTTATTTGATCAAGAGAAAAGGAGGGGA 992
BSNT_00310___ 993 GCAAAATGGCTAA 1005
|||...||.||||
BL04017___feu 993 GCAGCGTGCCTAA 1005
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