Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00311 and BL04016
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00311___feuA.1.5803.seq
# -bsequence dna-align/BL04016___feuA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00311___feuA-BL04016___feuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00311___feuA-BL04016___feuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00311___feuA
# 2: BL04016___feuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 990
# Identity: 708/990 (71.5%)
# Similarity: 708/990 (71.5%)
# Gaps: 69/990 ( 7.0%)
# Score: 2427.0
#
#
#=======================================
BSNT_00311___ 1 ATGAAAAAGATATC--TCTTACCTTATTAATCTTACTTCTCGCGCTGACG 48
||||.|||.||||| |.||.| ||||.||..|.||||||||||| .|
BL04016___feu 1 ATGAGAAAAATATCAATATTTC--TATTTATTCTCCTTCTCGCGCT--TG 46
BSNT_00311___ 49 GCGGCAGC---TTGCGG---CAGCAAAAATGAATCAA--CTGCCAGC-AA 89
|| ||||| .||||| ||||||| ||| || |||.|.|| |.
BL04016___feu 47 GC-GCAGCGGGATGCGGGAACAGCAAA---GAA--AAGGCTGGCGGCGAT 90
BSNT_00311___ 90 GGCAAGCGGCACAGCATCTGAGAAGAAGAAAATTGAATACCTTGATAAAA 139
|||||| .|||||||.||.|...||||||..||.||.|||||.|||.|.|
BL04016___feu 91 GGCAAG-AGCACAGCGTCAGCTGAGAAGAGCATCGAGTACCTCGATCATA 139
BSNT_00311___ 140 CATA-----TGAAGTAACTGTACCGACAGACAAAATCGCCATTACGGGAA 184
|||| ||||| .|.|||.|.||..||||||.|||||||||||
BL04016___feu 140 CATACAAGGTGAAG-----ATCCCGGCCGAACAAATCGTCATTACGGGAA 184
BSNT_00311___ 185 GCGTTGAATCAATGGAAGACGCGAAATTGCTTGACGTTCATCC-GCAAGG 233
||||.|||||.||||||||.||.||..|.||.||.|||||.|| || .||
BL04016___feu 185 GCGTGGAATCGATGGAAGATGCCAAGCTTCTGGATGTTCACCCAGC-CGG 233
BSNT_00311___ 234 CGCAATTTCATTCTCCGGCAAATTCCCTGATATGTTCAAAGA-CATCACT 282
.||.|||||.||||||||.||.|||||.|||.|||| .|||| |||.|||
BL04016___feu 234 TGCCATTTCCTTCTCCGGAAAGTTCCCGGATCTGTT-TAAGAGCATTACT 282
BSNT_00311___ 283 GATAAAGCCAAACCAAC------CGGAGAAAAAATGGAGCCAAATATTGA 326
|| ||||.|||| |||.||||||||||||||.||..|.||
BL04016___feu 283 GA------CAAAGCAACCGCTGTCGGCGAAAAAATGGAGCCGAACCTGGA 326
BSNT_00311___ 327 AAAGATTCTTGAAATGAAGCCAGATGTTATCCTTGCTTCAACAAAGTTTC 376
.||.||.|||||..||||.||.|||||.|||||.||||||||.||.||||
BL04016___feu 327 GAAAATCCTTGAGCTGAAACCGGATGTCATCCTGGCTTCAACGAAATTTC 376
BSNT_00311___ 377 CGGAAAAAACGCTGCAAAAAATCAGCACAGCA--GGCACGACGATCCCAG 424
|.||.|||..|.|| |||||.|.|.|.|.|| |..||||||||.||.|
BL04016___feu 377 CTGATAAAGTGGTG--AAAAAACTGGATAACATCGCGACGACGATTCCTG 424
BSNT_00311___ 425 TTTCTCATATCTCTTCAAACTGGAAGGAAAACATGATGCTGCTTGCCCAA 474
||||.|||.|.||||||||||||||.||.||..|.|.||||||.||..||
BL04016___feu 425 TTTCCCATGTTTCTTCAAACTGGAAAGACAATTTAAAGCTGCTGGCTGAA 474
BSNT_00311___ 475 CTGACCGGAAAAGAGAAAAAAGCAAAGAAAATTATTGCAGACTATGAACA 524
|||||.||.|||||..|.|||||.|||.|.||||||.|.||.||||||..
BL04016___feu 475 CTGACAGGCAAAGAAGATAAAGCGAAGCAGATTATTTCGGATTATGAAGC 524
BSNT_00311___ 525 GGATCTAAAAGAAACAAAAACAAA-------AATCAACGATAAAGCGAAA 567
.||.||.||.|||.|.|||||||| || |||| ||.|||
BL04016___feu 525 CGACCTCAAGGAAGCTAAAACAAAGCTTGAGAA--AACG-----GCAAAA 567
BSNT_00311___ 568 GATTCAAAAGCGCTTGTCATTAGAATTAGACAAGGCAACATTTACATTTA 617
|||.||||||||||.||..|.|||||.|||.|||||||.||.|..||.||
BL04016___feu 568 GATACAAAAGCGCTCGTTGTCAGAATCAGAAAAGGCAATATCTTTATCTA 617
BSNT_00311___ 618 CCCTGAACAGGTGTATTTCAACTCCACACTATACGGTGATTTAGGCCTTA 667
.||.|||.|.||.|..|||||.||||||.||||||||||..|.|||.|.|
BL04016___feu 618 TCCGGAAGACGTATTCTTCAATTCCACATTATACGGTGAGCTCGGCTTCA 667
BSNT_00311___ 668 AGGCGCCGAACGAAGTAAAAGCTGCAAAAGCGCAAGAGCTGATTTCATTA 717
..||.||.||.|||||.||.||.||||||||.||.|||.||.||||.|||
BL04016___feu 668 CAGCTCCAAAAGAAGTCAAGGCGGCAAAAGCCCAGGAGTTGGTTTCTTTA 717
BSNT_00311___ 718 GAAAAATTAAGTGAAATGAACCCGGACCATATTTTCGTCCAATTTTCTGA 767
||||||.|.|||||||||||.||||||.||||.||.||||||||.||.||
BL04016___feu 718 GAAAAACTGAGTGAAATGAATCCGGACTATATGTTTGTCCAATTCTCAGA 767
BSNT_00311___ 768 TGATGAAAATGCAGACAAACCTGATGCCTTAAAAGATTTAGAGAAAAATC 817
.|||||.|||||.|||||.||..||||..|.||||||.|.||||||||||
BL04016___feu 768 CGATGAGAATGCCGACAATCCGAATGCGCTGAAAGATCTGGAGAAAAATC 817
BSNT_00311___ 818 CAATCTGGAAAAGCCTTAAAGCAGTCAAAGAAGATCATGTGTATGTCAAC 867
||||.|||||||||.||...|||||.|||.|.||.|.|||.|.||||||.
BL04016___feu 818 CAATTTGGAAAAGCATTTCTGCAGTGAAAAATGACCGTGTATTTGTCAAT 867
BSNT_00311___ 868 TCAGTGGACCCTCTCGCACAAGGCGGCACAGCTTGGAGCAAAGTCCGTTT 917
.|.||.|||||.||.||.||.|||||.||.||.||||||||.||....||
BL04016___feu 868 GCTGTAGACCCGCTTGCGCAGGGCGGAACGGCATGGAGCAAGGTTGAATT 917
BSNT_00311___ 918 CCTGAAAGCGGCTGCTGAAAAATTGACACAAAACTAA--- 954
..|.||.||.||.|||||.||||||.|.||.|||.||
BL04016___feu 918 TTTAAAGGCTGCAGCTGAGAAATTGGCGCAGAACAAATAG 957
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