Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05590 and BL04011
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05590___ywnA.1.5803.seq
# -bsequence dna-align/BL04011___ywnA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05590___ywnA-BL04011___ywnA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05590___ywnA-BL04011___ywnA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05590___ywnA
# 2: BL04011___ywnA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity: 299/413 (72.4%)
# Similarity: 299/413 (72.4%)
# Gaps: 22/413 ( 5.3%)
# Score: 1021.0
#
#
#=======================================
BSNT_05590___ 1 ATGATTAACAGCCGTCTTGCTGTTGCCATTCATATTTTATCCCTCATCTC 50
|||.|.||||.|||||||.|.||.|||||||||||.||.||..|.|||
BL04011___ywn 1 ATGGTGAACACCCGTCTTTCAGTGGCCATTCATATATTGTCTTTAATC-- 48
BSNT_05590___ 51 GATGGATGAAAAAAC------ATCTTCAGAAATCATTGCAGACAGTGTCA 94
|..|.|||..| ||||||.|||||.||.||.|..||.||.|
BL04011___ywn 49 ----GCCGCAAACCCGCGGGAATCTTCGGAAATGATCGCCGGGAGCGTTA 94
BSNT_05590___ 95 ACACGAATCCGGTAGTTGTGCGAAGAATGATCAGCCTGCTGAAAAAAGCT 144
|.|||||.|||||.||..|..|..|.||||||||||.|||.||||||||.
BL04011___ywn 95 ATACGAACCCGGTTGTAATCAGGCGCATGATCAGCCAGCTCAAAAAAGCC 144
BSNT_05590___ 145 GATATTCTCACATCACGCGCCGGG-GT-GCCGGGTGCAAGCCTCAAAAAA 192
|.||||||.||.||.|| |||||| || |||||| ||||||||.||||.|
BL04011___ywn 145 GGTATTCTGACGTCGCG-GCCGGGAGTGGCCGGG-GCAAGCCTGAAAAGA 192
BSNT_05590___ 193 GATCCTGCTGATATTTCTCTTTTAGAAGTGTACCGGGCTGTCCAAAAGCA 242
|||||.|..|||||.|||||..|.||..|.|||||.||.||.||...|||
BL04011___ywn 193 GATCCCGAAGATATATCTCTGCTTGATATTTACCGCGCGGTTCAGCCGCA 242
BSNT_05590___ 243 AGAAGAACTCTTTGCGGTTCATGAAAACCCGAATCCGAAATGTCCGGTAG 292
.||.|||.|.||||||.|||||||.||.||||||||.||.||||||||.|
BL04011___ywn 243 TGAGGAATTATTTGCGATTCATGACAAGCCGAATCCAAACTGTCCGGTTG 292
BSNT_05590___ 293 GGAAAAAAATTC--AGAACGCTCTGGATGAAACGTTTGAAAGTGTGCA-A 339
|.|.|.|||||| |.|||| ||.|||.||||||||.|.||.||.|| .
BL04011___ywn 293 GAAGACAAATTCAAACAACG--CTTGATCAAACGTTTCACAGCGTTCAGC 340
BSNT_05590___ 340 AGAGCGATGGAAAATGAACTGGCAAGCAAGTCATTAAAAGATGTTATGAA 389
|| ||||||||.||.|||.||||.||||||||..|.|||||.||..|.|.
BL04011___ywn 341 AG-GCGATGGAGAACGAATTGGCCAGCAAGTCTCTTAAAGACGTCTTAAC 389
BSNT_05590___ 390 TCATCTCTTTTAA 402
|||||||||||||
BL04011___ywn 390 TCATCTCTTTTAA 402
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