Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05616 and BL04004
See
Amino acid alignment /
Visit
BSNT_05616 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05616___murAA.1.5803.seq
# -bsequence dna-align/BL04004___murAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05616___murAA-BL04004___murAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05616___murAA-BL04004___murAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05616___murAA
# 2: BL04004___murAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1321
# Identity: 1053/1321 (79.7%)
# Similarity: 1053/1321 (79.7%)
# Gaps: 20/1321 ( 1.5%)
# Score: 4215.5
#
#
#=======================================
BSNT_05616___ 1 TTGGAAAAAATCATCGTCCGCGGCGGTCAGAAGTTAAACGGCACAGTCAA 50
||||||||||||||||||||||||||||..||||||||||||||||||||
BL04004___mur 1 TTGGAAAAAATCATCGTCCGCGGCGGTCGAAAGTTAAACGGCACAGTCAA 50
BSNT_05616___ 51 AGTTGAAGGCGCTAAAAATGCCGTTTTACCTGTTATCGCTGCATCTTTAT 100
|||||||||.||.|||||||||||||||||.|||||||||||||||||||
BL04004___mur 51 AGTTGAAGGAGCAAAAAATGCCGTTTTACCAGTTATCGCTGCATCTTTAT 100
BSNT_05616___ 101 TAGCAAGTGAAGAAAAAAGCGTAATTTGTGATGTACCTACGCTCTCCGAT 150
||||.||||||||||||||||||||.||||||||.|||||||||||||||
BL04004___mur 101 TAGCCAGTGAAGAAAAAAGCGTAATATGTGATGTGCCTACGCTCTCCGAT 150
BSNT_05616___ 151 GTATATACAATTAACGAAGTGTTGCGTCATTTAGGAGCAGATGTGCATTT 200
||||||||.||||||||||||||.|||||||||||.|||..|||.|||||
BL04004___mur 151 GTATATACGATTAACGAAGTGTTACGTCATTTAGGCGCAAGTGTACATTT 200
BSNT_05616___ 201 TGAAAATAATGAAGTGACTGTAAATGCTTCATACGCTTTGCAAACTGAAG 250
||||||||||..|||.||.||..||||.||...|.|||||...||.||||
BL04004___mur 201 TGAAAATAATACAGTAACGGTTGATGCATCTCGCACTTTGTCTACGGAAG 250
BSNT_05616___ 251 CACCTTTTGAATATGTTCGTAAAATGCGTGCGTCTGTGCTTGTCATGGGG 300
|.||.||.||||||||||||||||||||.||.||.||..|.||.|||||.
BL04004___mur 251 CTCCGTTCGAATATGTTCGTAAAATGCGCGCATCCGTATTGGTGATGGGT 300
BSNT_05616___ 301 CCGCTTCTTGCGCGTACAGGTCATGCAAGAGTTGCACTTCCGGGCGGATG 350
|||||||||||.||.|||||.|||.|.|||||.||..|.||.||.|||||
BL04004___mur 301 CCGCTTCTTGCTCGCACAGGCCATTCGAGAGTGGCTTTGCCTGGAGGATG 350
BSNT_05616___ 351 CGCAATTGGTTCCAGACCGATTGATCAGCATTTAAAAGGTTTTGAAGCAA 400
.|||||.|||||.||||||||.|||||||||.|.|||||.||||||||||
BL04004___mur 351 TGCAATCGGTTCAAGACCGATCGATCAGCATCTGAAAGGCTTTGAAGCAA 400
BSNT_05616___ 401 TGGGCGCAGAAATCAAAGTCGGTAATGGCTTCATTGAAGCTGA-AGTAAA 449
||||.|||.||||.||.|||||.||.|||||.|||||||| || .|||.|
BL04004___mur 401 TGGGGGCAAAAATTAAGGTCGGAAACGGCTTTATTGAAGC-GACTGTAGA 449
BSNT_05616___ 450 AGGCCGACTGCAAGGCGCAAAAATTTATCTGGACTTCCCAAGTGTAGGAG 499
||||||.||.|||||.||.||||||||.||.||.|||||.|||||.||||
BL04004___mur 450 AGGCCGCCTTCAAGGAGCGAAAATTTACCTTGATTTCCCTAGTGTCGGAG 499
BSNT_05616___ 500 CTACAGAGAACCTGATTATGGCAGCCGCTCTAGCTGAAGGAACAACTACG 549
|.||.||.||||||||||||||.||.|||.|.|||||.||.||.||.||.
BL04004___mur 500 CAACTGAAAACCTGATTATGGCTGCAGCTTTGGCTGAGGGCACGACAACT 549
BSNT_05616___ 550 CTGGAAAACGTGGCAAAAGAACCCGAAATCGTTGATTTAGCAAACTATAT 599
||.|||||.|..||.|||||.||.||||||||||||.|.||.||||||||
BL04004___mur 550 CTCGAAAATGCTGCTAAAGAGCCTGAAATCGTTGATCTGGCTAACTATAT 599
BSNT_05616___ 600 CAACGGCATGGGCGGAAAAATCCGCGGAGCTGGCACCGGCACCATCAAAA 649
|||.|..||||||||.|||||.||.||.||.||.||.||||||||.||||
BL04004___mur 600 CAATGCAATGGGCGGTAAAATTCGGGGTGCCGGTACAGGCACCATTAAAA 649
BSNT_05616___ 650 TTGAAGGAGTCGAAAAGCTTCACGGCGTAAAACACCATATTATTCCTGAC 699
|||||||.||..|...||||||.||.|.||||||....||||||||||||
BL04004___mur 650 TTGAAGGCGTTAAGGCGCTTCATGGGGCAAAACATACGATTATTCCTGAC 699
BSNT_05616___ 700 CGCATTGAAGCGGGCACATTTATGGTTGCTGCTGCAATCACTGAAGGAAA 749
||.||.||.|||||.||.||.||||||||.||.||.||.||.|||||.||
BL04004___mur 700 CGGATAGAGGCGGGAACGTTCATGGTTGCCGCGGCGATTACCGAAGGGAA 749
BSNT_05616___ 750 CGTATTAGTAAAAGGAGCCGTTCCTGAACACCTCACCTCTTTAATTGCAA 799
||||.|.|||||.|||||.||||||||.|||.|.||.|||||||||||.|
BL04004___mur 750 CGTACTGGTAAAGGGAGCGGTTCCTGAGCACTTAACATCTTTAATTGCGA 799
BSNT_05616___ 800 AAATGGAAGAGATGGGTGTAACAATTAAGGATGAAGGTGAAGGTCTGCGT 849
||||||||||.|||||.||...|||...|||.|||||.||.|||||.||.
BL04004___mur 800 AAATGGAAGAAATGGGCGTTCAAATCTTGGAAGAAGGAGACGGTCTTCGG 849
BSNT_05616___ 850 GTCATCGGCCCGAAAGAACTTAAACCGATTGACATCAAAACAATGCCTCA 899
.|||||||.||....|||.|.||.||.|||||..|.|||||||||||.||
BL04004___mur 850 ATCATCGGTCCTTCTGAATTGAAGCCTATTGATTTAAAAACAATGCCACA 899
BSNT_05616___ 900 CCCGGGCTTCCCGACTGATATGCAGTCACAAATGATGGCGCTTCTGCTTC 949
.||.||.|||||||||||||||||||||||.||||||||.|||.||.|.|
BL04004___mur 900 TCCAGGTTTCCCGACTGATATGCAGTCACAGATGATGGCTCTTTTGATGC 949
BSNT_05616___ 950 GTGCAAGCGGCACAAGCATGATTACAGAAACCGTTTTTGAAAACCGTTTT 999
|.||||..||.||.||||||||.|||||||||||.|||||.|||||.||.
BL04004___mur 950 GCGCAAATGGAACCAGCATGATCACAGAAACCGTCTTTGAGAACCGCTTC 999
BSNT_05616___ 1000 ATGCATGCGGAAGAATTCCGCCGTATGAATGGTGATATCAAGATTGAAGG 1049
|||||.|||||||||||||||||||||||.||.|||||.||.||.|||||
BL04004___mur 1000 ATGCACGCGGAAGAATTCCGCCGTATGAACGGAGATATTAAAATCGAAGG 1049
BSNT_05616___ 1050 ACGTTCTGTCATCATTAACGGTCCTGTACAGCTTCAGGGAGCTGAAGTTG 1099
.|||||||||||||||||.||||||||.||||||||.||.||||||||||
BL04004___mur 1050 CCGTTCTGTCATCATTAATGGTCCTGTGCAGCTTCAAGGCGCTGAAGTTG 1099
BSNT_05616___ 1100 CAGCGACTGATTTGCGTGCAGGTGCAGCGCTGATTCTTGCGGGGTTAGTG 1149
|.||.||.|||.|.||.||.||.|||||.||.||.|||||.||..|.||.
BL04004___mur 1100 CCGCAACGGATCTTCGCGCCGGCGCAGCTCTTATCCTTGCTGGCCTTGTT 1149
BSNT_05616___ 1150 GCTGAAGGTCACACACGTGTTACTGAATTGAAGCACTTAGACCGCGGTTA 1199
|||||.|||||.|||||.||.||.|||||.||.||.||||||||.||.||
BL04004___mur 1150 GCTGACGGTCATACACGCGTAACCGAATTAAAACATTTAGACCGTGGATA 1199
BSNT_05616___ 1200 CGTTGATTTCCATCAGAAGCTTGCCGCTCTGGGCGCAGACATCGAACGTG 1249
.||..|.|||||.||.||.|||||||.|||.|||||.||.||.||.||.|
BL04004___mur 1200 TGTCAACTTCCACCAAAAACTTGCCGGTCTCGGCGCTGATATTGAGCGCG 1249
BSNT_05616___ 1250 TAAATGATG-AGTCTGCTTCTGAGCA--------AGAGAATAAAGAAGTC 1290
|.||.|||| || .|||| .||.|||||||||||.
BL04004___mur 1250 TTAACGATGAAG---------AAGCAGTTCATATTGAAAATAAAGAAGTT 1290
BSNT_05616___ 1291 GTTTCTGACTTAAATGCATAA 1311
||.||.||.||||||||||||
BL04004___mur 1291 GTATCCGATTTAAATGCATAA 1311
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.