Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05618 and BL04002
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:43
# Commandline: needle
# -asequence dna-align/BSNT_05618___ywzB.1.5803.seq
# -bsequence dna-align/BL04002___ywzB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05618___ywzB-BL04002___ywzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05618___ywzB-BL04002___ywzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: BL04002___ywzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 238
# Identity: 168/238 (70.6%)
# Similarity: 168/238 (70.6%)
# Gaps: 11/238 ( 4.6%)
# Score: 543.0
#
#
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BSNT_05618___ 1 ATG--AGTGTATTGGGACAGCAGGCTGCAATCGGCATTGTCGTTCACCTG 48
||| ||.| .|.|||||.||||||||..||.|.||..|||||||.||.
BL04002___ywz 1 ATGGAAGAG--ATCGGACAACAGGCTGCTGTCAGTATCATCGTTCATCTT 48
BSNT_05618___ 49 ATTTTTATAGCAGTGACTTGGTGGGCGTTGCAAGCCGTCAATATAGATCC 98
.|||||||.|||.|||||||||||||..|.|..||.||||||||.|||||
BL04002___ywz 49 TTTTTTATTGCATTGACTTGGTGGGCTCTTCTGGCGGTCAATATTGATCC 98
BSNT_05618___ 99 GTTAATCAAAAAAGGCAAAGTCGTGCAGGCTAGACTCCTGATGATTTTGC 148
|.|.||||..|||||.||||||.|.|||||.||..|..|.|||||..|..
BL04002___ywz 99 GCTTATCAGGAAAGGAAAAGTCATTCAGGCGAGGGTGTTAATGATCATCA 148
BSNT_05618___ 149 TGACAATTGCCATTGGAACGGCCGT-TGCTAATTTCTTTTTAGATTATCT 197
|.|||||.|||.|.||..|..|||| .|| |||||.||.||.||.|||||
BL04002___ywz 149 TTACAATCGCCGTCGGCTCCACCGTCAGC-AATTTTTTCTTGGACTATCT 197
BSNT_05618___ 198 CAATTATTCACAG-CAGCTTCCCTATCTATTTTAA--- 231
..||||||| ||| |||||||...||.||||||.|
BL04002___ywz 198 TTATTATTC-CAGACAGCTTCAAAATTTATTTTCATGA 234
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