Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05622 and BL04000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05622___atpD.1.5803.seq
# -bsequence dna-align/BL04000___atpD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05622___atpD-BL04000___atpD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05622___atpD-BL04000___atpD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05622___atpD
# 2: BL04000___atpD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1429
# Identity: 1168/1429 (81.7%)
# Similarity: 1168/1429 (81.7%)
# Gaps: 14/1429 ( 1.0%)
# Score: 4712.0
#
#
#=======================================
BSNT_05622___ 1 ATGAAGAAAGGACGCGTTAGCCAGGTATTAGGACCGGTCGTCGACGTGCG 50
|||||.||||||||||||||||||||||||||.||||||||.||.||.||
BL04000___atp 1 ATGAAAAAAGGACGCGTTAGCCAGGTATTAGGGCCGGTCGTAGATGTTCG 50
BSNT_05622___ 51 TTTTGAAGACGGTCACTTGCCTGAAATTTATAATGCGATTAAAATTTCAC 100
|||||||||||||||||||||||||||.|||||||||||||||.||.|||
BL04000___atp 51 TTTTGAAGACGGTCACTTGCCTGAAATATATAATGCGATTAAAGTTACAC 100
BSNT_05622___ 101 AGCCAGCTGCA-AGTGAAAACGAAGTAGGTATTGATTTAACGCTTGAGGT 149
|...||| ||| |..||.||.|||||.|..||.|||.|.||.|||||.||
BL04000___atp 101 ATAAAGC-GCAGAACGAGAATGAAGTGGACATCGATCTTACCCTTGAAGT 149
BSNT_05622___ 150 CGCTCTTCATTTAGGTGATGATACAGTCCGTACAATCGCAATGGCATCTA 199
.||.|||||.||.|||||||||.||||.||||||||.||||||||.||.|
BL04000___atp 150 AGCGCTTCACTTGGGTGATGATTCAGTTCGTACAATTGCAATGGCTTCAA 199
BSNT_05622___ 200 CGGATGGTGTT-CAGCGCGGTATGGAAGCTGTAGATACAGGAGCGCCAAT 248
|.||.|||||| || |||||.||||||||..|.||....||||.|||.||
BL04000___atp 200 CTGACGGTGTTACA-CGCGGAATGGAAGCCATCGACCTGGGAGAGCCGAT 248
BSNT_05622___ 249 CTCAGTACCGGTTGGTGATGTAACACTTGGACGTGTATTTAACGTTCTCG 298
|||.||.|||||.||..|.||||||||.||.||.||||||||.||.||||
BL04000___atp 249 CTCCGTTCCGGTCGGAAACGTAACACTCGGCCGCGTATTTAATGTACTCG 298
BSNT_05622___ 299 GAGAAAATATTGATTTGAATGAGCCGGTTCCTGCGGATGC-GAAAAAGGA 347
|.||||||||.||||||.||||||||.||||.||.||||| |..||| ||
BL04000___atp 299 GGGAAAATATCGATTTGGATGAGCCGCTTCCGGCTGATGCTGCCAAA-GA 347
BSNT_05622___ 348 TCCGATTCACAGACAGGCGCCTTCATTCGATCAGCTTTCAACAGAAGTTG 397
|||||||||||||.|.||.||...|||.||||||||.||||||||.||||
BL04000___atp 348 TCCGATTCACAGAGAAGCTCCAAAATTTGATCAGCTATCAACAGAGGTTG 397
BSNT_05622___ 398 AAATTCTT-GAAACAGGTATTAAAGTTGTTGATTTGCTTGCTCCTTACAT 446
||| |||| ||.||.|||||||||||.||.||.|||||.|||||.||.||
BL04000___atp 398 AAA-TCTTAGAGACGGGTATTAAAGTCGTCGACTTGCTCGCTCCATATAT 446
BSNT_05622___ 447 TAAGGGCGGTAAAATCGGATTGTTCGGTGGTGCCGGTGTAGGTAAAACCG 496
.||.|||||.||.|||||..|.|||||.||.||.||.||.||.|||||||
BL04000___atp 447 CAAAGGCGGAAAGATCGGTCTTTTCGGAGGAGCGGGAGTTGGAAAAACCG 496
BSNT_05622___ 497 TATTAATCCAGGAATTAATCAACAACATCGCGCAAGAGCACGGCGGTATC 546
|.||.||.|||||..|.||||||||||||||.||||||||||||||||||
BL04000___atp 497 TTTTGATTCAGGAGCTGATCAACAACATCGCTCAAGAGCACGGCGGTATC 546
BSNT_05622___ 547 TCTGTATTCGCCGGCGTAGGAGAGCGTACTCGTGAAGGGAACGACCTTTT 596
|||||||||||.||.||.||.||||||||.||||||||.||||||||||.
BL04000___atp 547 TCTGTATTCGCAGGTGTCGGCGAGCGTACGCGTGAAGGAAACGACCTTTA 596
BSNT_05622___ 597 CTACGAAATGAGTGACTCTGGCGTAATCAACAAAACAGCCATGGTATTCG 646
|||.|||||||..||.||.|||||.|||..||||||.||.|||||.||||
BL04000___atp 597 CTATGAAATGAAAGATTCCGGCGTTATCGGCAAAACGGCAATGGTCTTCG 646
BSNT_05622___ 647 GACAAATGAACGAGCCGCCGGGCGCACGTATGCGTGTTGCTTTGACAGGC 696
|.||.||||||||||||||.||.||.||.|||||.|||||.|||||.||.
BL04000___atp 647 GTCAGATGAACGAGCCGCCTGGTGCGCGGATGCGCGTTGCCTTGACCGGA 696
BSNT_05622___ 697 CTTACAATGGCTGAGCACTTCCGTGATGTACAAGGACAGGACGTACTGTT 746
|||||||||||.|||||.|||||||||..|.||||.|||||||||.||||
BL04000___atp 697 CTTACAATGGCCGAGCATTTCCGTGATAAAGAAGGCCAGGACGTATTGTT 746
BSNT_05622___ 747 CTTCATCGATAACATTTTCCGTTTCACACAAGCGGGTTCAGAGGTTTCAG 796
|||.|||||||||||.|||||.|||||.|||||.||.||.||.||.||.|
BL04000___atp 747 CTTTATCGATAACATCTTCCGATTCACTCAAGCAGGATCTGAAGTATCTG 796
BSNT_05622___ 797 CCCTTCTTGGCCGTATGCCTTCAGCGGTTGGTTATCAGCCGACGCTTGCA 846
|.||||||||.||.|||||.|||||||||||||||||||||||||||||.
BL04000___atp 797 CACTTCTTGGACGCATGCCGTCAGCGGTTGGTTATCAGCCGACGCTTGCG 846
BSNT_05622___ 847 ACTGAGATGGGTCAGCTCCAAGAGCGTATCACGTCTACGAACGTTGGATC 896
||.||.|||||||||||.||.||.||.|||||.||.||.||.||.|||||
BL04000___atp 847 ACCGAAATGGGTCAGCTTCAGGAACGGATCACATCAACAAATGTCGGATC 896
BSNT_05622___ 897 AGTTACATCTATCCAGGCGATCTACGTGCCTGCCGATGACTACACTGACC 946
.||.|||||.||.||||||||||||||.||||||||||||||.|||||||
BL04000___atp 897 TGTAACATCGATTCAGGCGATCTACGTTCCTGCCGATGACTATACTGACC 946
BSNT_05622___ 947 CGGCGCCGGCGACAACGTTCGCTCACTTGGATGCGACAACAAACCTTGAG 996
||||||||||.||.|||||||||||||||||||||||.||.|||||||||
BL04000___atp 947 CGGCGCCGGCTACGACGTTCGCTCACTTGGATGCGACGACGAACCTTGAG 996
BSNT_05622___ 997 CGTAAATTAACTGAAATGGGTATTTACCCTGCGGTTGATCCGTTGGCATC 1046
|||||..|..|.||||||||.|||||.||||||||.||||||.|.|||||
BL04000___atp 997 CGTAAGCTGTCGGAAATGGGGATTTATCCTGCGGTCGATCCGCTTGCATC 1046
BSNT_05622___ 1047 TACATCACGCGCCCTTGCTCCTGAAATTGTCGGAGAAGAGCATTATGCGG 1096
.||.||.||.||.|||.|.||||||||.||||||||||||||.||||..|
BL04000___atp 1047 CACTTCCCGTGCGCTTTCGCCTGAAATCGTCGGAGAAGAGCACTATGAAG 1096
BSNT_05622___ 1097 TTGCGCGTGAAGTACAGTCA-ACGCTTCAGCGTTACAAAGAGCTTCAAGA 1145
|.|||||....||.||| || |..||.|||||.||||||||||||||.||
BL04000___atp 1097 TGGCGCGCAGCGTTCAG-CAGATCCTGCAGCGCTACAAAGAGCTTCAGGA 1145
BSNT_05622___ 1146 TATCATTGCGATTCTCGGTATGGATGAACTAGGC-GAGGAAGACAAACTT 1194
||||||.|||||.|||||.||||||| |.|.|.| ||.|||||.||.|||
BL04000___atp 1146 TATCATCGCGATGCTCGGAATGGATG-AGTTGTCAGACGAAGATAAGCTT 1194
BSNT_05622___ 1195 GTCGTTCA-CCGCGCACGCCGTATCCAGTTCTTCCTTTCTCAGAACTTCC 1243
|||| ||| |||.||.|||||..|.||.||||||||.||.||.|||||||
BL04000___atp 1195 GTCG-TCAGCCGTGCGCGCCGCGTACAATTCTTCCTGTCGCAAAACTTCC 1243
BSNT_05622___ 1244 ACGTGGCTGAACAGTTCACTGGACAAAAAGGTTCTTACGTGCCTGTAAAA 1293
||||.|||||||||||.||.||||||||||||||||||||.|||||.|||
BL04000___atp 1244 ACGTAGCTGAACAGTTTACAGGACAAAAAGGTTCTTACGTACCTGTCAAA 1293
BSNT_05622___ 1294 GAGACGGTACAAGGCTTCAAAGAAATCTTAGCCGGTAAATACGACCATCT 1343
||.||||||.|||||||||||||||||.|.|..|||||.||.||.||.||
BL04000___atp 1294 GAAACGGTAAAAGGCTTCAAAGAAATCCTTGAAGGTAAGTATGATCACCT 1343
BSNT_05622___ 1344 TCCAGAAGATGCGTTCCGTCTTGTAGGCCGTATCGAAGAAGTTGTTGAGA 1393
|||.||.||.||.|||||.|||||.|||||.||||||||||||||.||.|
BL04000___atp 1344 TCCTGAGGACGCTTTCCGCCTTGTCGGCCGAATCGAAGAAGTTGTCGAAA 1393
BSNT_05622___ 1394 AAGCAAAAGAAATGGGTGTAGAAGTTTAA 1422
||||.||||||||||||||||||||.|||
BL04000___atp 1394 AAGCGAAAGAAATGGGTGTAGAAGTATAA 1422
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