Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05623 and BL03999
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05623___atpG.1.5803.seq
# -bsequence dna-align/BL03999___atpG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05623___atpG-BL03999___atpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05623___atpG-BL03999___atpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05623___atpG
# 2: BL03999___atpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 894
# Identity: 659/894 (73.7%)
# Similarity: 659/894 (73.7%)
# Gaps: 69/894 ( 7.7%)
# Score: 2349.5
#
#
#=======================================
BSNT_05623___ 1 TTGGCCTCATTACGCGATATTAAGTCAAGGATCACGTCAACGAAAAAAAC 50
||||||||||||||.||||||||.||.|||||..|.||||..|||||||.
BL03999___atp 1 TTGGCCTCATTACGGGATATTAAATCCAGGATTGCTTCAAATAAAAAAAT 50
BSNT_05623___ 51 AAGTCAGATTACAAAAGCCATGCAGATGGTATCTGCGGCTAAGCTGAATC 100
.|||||.|||||.||||||..|.|.|||||.|||||..|.||||||||.|
BL03999___atp 51 GAGTCAAATTACGAAAGCCCAGGAAATGGTTTCTGCTTCAAAGCTGAACC 100
BSNT_05623___ 101 GTGCTGAAAACAATGCAAAATCATTTGTGCCATATATGGATAAAATCCAA 150
|.|||||||||||.||.|||||.|||||.||.||||||||.|||||.||.
BL03999___atp 101 GGGCTGAAAACAAAGCGAAATCGTTTGTTCCTTATATGGAAAAAATGCAG 150
BSNT_05623___ 151 GAGGTTG-------TGTCAAACGTCGGA-AGAGTTTCCGGCAACGTAAAG 192
||.||.| |.||..| |||||| |.| ||||| ||.
BL03999___atp 151 GAAGTCGTTGCCGATATCGCA-GTCGGATACA----CCGGC------AAA 189
BSNT_05623___ 193 CATCCGATGCT-TCTCAGCAGAGAAGTGAAAAAAACGGCATACCTTGTCA 241
||.||||||.| || .|||.|...||||||....||.|..||||||||||
BL03999___atp 190 CACCCGATGATGTC-AAGCCGCCCAGTGAAGCGGACCGGGTACCTTGTCA 238
BSNT_05623___ 242 TTACGTCTGACCGCGGTCTT-GCCGGCGCTTTTAA--CA---GTTCGGTT 285
|.||..|||||||||| ||| ||.||.||.||.|| || ||.|
BL03999___atp 239 TCACAGCTGACCGCGG-CTTGGCGGGGGCGTTCAATGCAAACGTAC---- 283
BSNT_05623___ 286 TTACGGAATGCTTATC--AGGCCATGCAAGAACGTCATCAGTCTAAGGAT 333
|.||.||.||.|||| ||| ||.||.|||||.|||||.||.||.|||
BL03999___atp 284 -TCCGCAAAGCGTATCAAAGG--ATTCAGGAACGCCATCAATCCAAAGAT 330
BSNT_05623___ 334 GAGTATGCGGTGATTGCCATCGGAAGAGTGGGCCGTGATTTCTTTAAGAA 383
|||||||||||.||.||..||||||||.||||.||.|||||||||||.||
BL03999___atp 331 GAGTATGCGGTCATCGCGGTCGGAAGAATGGGGCGCGATTTCTTTAAAAA 380
BSNT_05623___ 384 ACG-GGAGATTCCGATCATTTCCGAGTTAACAGGACTTGGGGATGAAGTG 432
.|| ||| |||||..|||||||.||..|.||.||..|..||||.||||||
BL03999___atp 381 GCGCGGA-ATTCCTGTCATTTCTGAAATGACGGGGATCAGGGACGAAGTG 429
BSNT_05623___ 433 ACGTTTACAGAAATTAAAGATCTTGCCCGTCA-AACGATCCAAATGTTTA 481
||||||.|||||||.|||||| |||.|...|| .|||.|.|||||||.||
BL03999___atp 430 ACGTTTTCAGAAATCAAAGAT-TTGGCGAACAGCACGGTGCAAATGTATA 478
BSNT_05623___ 482 TAGACGGTGCGTTTGATGAATTGCACCTTGTT-TATAACCATTTTGTCAG 530
|.||||...|.|||||||||.||.|.| |||| ||.||||||||||||||
BL03999___atp 479 TTGACGAAACCTTTGATGAACTGTATC-TGTTCTACAACCATTTTGTCAG 527
BSNT_05623___ 531 CGCCATTACTCAAGAAGTAACGGAGAAAAAACTTCTGCCGTTATCTGAT- 579
|||.|||.|.||.||.||||||||||||||.||.|||||.||..|.|||
BL03999___atp 528 CGCGATTTCCCAGGAGGTAACGGAGAAAAAGCTGCTGCCTTTGACAGATA 577
BSNT_05623___ 580 TTGGGC------AGCGGCGGCGGAAAAAGAACGGCGTCTTATGAATTTGA 623
|||.|| | |||||||| ||||.|.|||.|||||
BL03999___atp 578 TTGCGCCTAACAA---------GAAAAAGA----CGTCATTTGAGTTTGA 614
BSNT_05623___ 624 ACCATCTGAAGAGGAGGTTCTGGAGGTTTTGCTTCCTCAATATGCAGAAA 673
|||...||||||.|||.|||||||.||..|.|||||.||.|||||.||||
BL03999___atp 615 ACCGGATGAAGAAGAGATTCTGGAAGTGCTCCTTCCCCAGTATGCGGAAA 664
BSNT_05623___ 674 GCTTAATCTTCGGTGCGCTTCTTGACAGTAAAGCAAGTGAGCACGCTGCA 723
||||.||.||.||.||||||||||||||.|||||.||.||.||.|||||.
BL03999___atp 665 GCTTGATTTTTGGCGCGCTTCTTGACAGCAAAGCGAGCGAACATGCTGCG 714
BSNT_05623___ 724 AGAATGACGGCGATGAAAAATGCGACAGACAACGCGAAGGAACTTAT--- 770
||||||||||||||||.|||||||||||||||.||.||.||..||||
BL03999___atp 715 AGAATGACGGCGATGAGAAATGCGACAGACAATGCAAAAGAGATTATCGC 764
BSNT_05623___ 771 CGATTCACTTTCGCTTTCTTACAACCGCGCTCGCCAAGCAGCCATCACAC 820
|||| |||...||.||.||||||||.||.||.||.|||.|||||||.|
BL03999___atp 765 CGAT---CTTGAACTGTCATACAACCGTGCCCGTCAGGCATCCATCACGC 811
BSNT_05623___ 821 AAGAAATTACGGAAATTGTCGGCGGAGCAGCCGCTTTAGAATAG 864
|.|||||||||||||||||||||||.|||||.||||||||||||
BL03999___atp 812 AGGAAATTACGGAAATTGTCGGCGGTGCAGCTGCTTTAGAATAG 855
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