Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05630 and BL03994
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:44
# Commandline: needle
# -asequence dna-align/BSNT_05630___atpB.1.5803.seq
# -bsequence dna-align/BL03994___atpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05630___atpB-BL03994___atpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05630___atpB-BL03994___atpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05630___atpB
# 2: BL03994___atpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 496/741 (66.9%)
# Similarity: 496/741 (66.9%)
# Gaps: 75/741 (10.1%)
# Score: 1756.0
#
#
#=======================================
BSNT_05630___ 0 -------------------------------------------------- 0
BL03994___atp 1 TTGAATCACGAATCTAGAATTGTTAATTTCTTAGGCCTCAATTTTGATTT 50
BSNT_05630___ 1 -------------ATGATTACTGTGGCGAGTGTGATTGTTTTATTGATTG 37
||||||||||||.|.||..|.||.||.||..||||.|
BL03994___atp 51 AACTAGCATTCTAATGATTACTGTGACAAGCATCATCGTCTTTCTGATAG 100
BSNT_05630___ 38 CTATATTGACGACAAGAACGCTTTCGATCCGTCCCGGA--AAAGCCCAGA 85
|..|..||||.||||||||.||..|||||||.|| || |||||.||||
BL03994___atp 101 CGGTGCTGACCACAAGAACACTCGCGATCCGGCC--GACGAAAGCTCAGA 148
BSNT_05630___ 86 ACTTTATGGAATGGATTGTTGATTTCGTACGCAATATTATTGGCAGTACA 135
||||||||||.||||||||.||.||.||.|||||||||||.|||||.|||
BL03994___atp 149 ACTTTATGGAGTGGATTGTCGACTTTGTTCGCAATATTATCGGCAGCACA 198
BSNT_05630___ 136 ATGGATTTAAAA----ACAGGGGCTAACTTCTTGGCACTTGGTGTCACAT 181
||||||.|.||| .|||.| ||||..|.||.|||||..|.||..
BL03994___atp 199 ATGGATCTTAAAGTCGGCAGAG----ACTTTCTCGCCCTTGGCATAACCC 244
BSNT_05630___ 182 TGCTGATGTACATATTTGTGTCGAATATGCTGGGGCTGCCGTTCTCTATT 231
|||||||||||||||||||..|.||.|||||.||.||.|||||.||.||.
BL03994___atp 245 TGCTGATGTACATATTTGTTGCCAACATGCTCGGCCTTCCGTTTTCCATA 294
BSNT_05630___ 232 ACAATCGGACATGAGCTCTGGTGGAAGTCTCCGACAGCCGATCCTGCCAT 281
|||.|.||.||.||..|.||||||||.||.||.||.||||||||.||..|
BL03994___atp 295 ACAGTAGGCCACGAATTATGGTGGAAATCCCCTACGGCCGATCCGGCGGT 344
BSNT_05630___ 282 TACATTAACGCTAGCCGTGATGGTTGTTGCTTTAACCCACTACTATGGTG 331
|||.|||||.||.|||||.|||||.||.|...|.||.||.|||||.||.|
BL03994___atp 345 TACTTTAACCCTCGCCGTCATGGTAGTAGGCCTCACTCATTACTACGGAG 394
BSNT_05630___ 332 TGAAGATGAAAGGGCTCAAGGAATATTCCAAAGACTATTTAAGACCTGTT 381
||||.|.|||||||.|...|||.|||.|||||||.|..||.|||||..||
BL03994___atp 395 TGAAAAGGAAAGGGTTGGGGGAGTATACCAAAGATTTCTTCAGACCAATT 444
BSNT_05630___ 382 CCATTCATGCTCCCGATGAAAATCATCGAAGAGTTTGCGAATACGCTGAC 431
||||...|..|.|||.|.||||||||.|||||.||||||||.||..|.||
BL03994___atp 445 CCATATTTAGTGCCGCTCAAAATCATTGAAGAATTTGCGAACACATTAAC 494
BSNT_05630___ 432 TCTAGGTTTACGGCTGTATGGTAACATCTTCGCCGGTGAGATTCTTCTCG 481
..|.||.||.||.||.||.|||||.||.||||||||.||.|||||.||||
BL03994___atp 495 ATTGGGATTGCGTCTTTACGGTAATATTTTCGCCGGCGAAATTCTGCTCG 544
BSNT_05630___ 482 GCCTGCTTGCGGGATTAGCGACAAGCCACTATTCGCAAAGCGTGGCTCTC 531
||||.|||||.|||.|.||.||.|.|..||||||.||||||.|....||.
BL03994___atp 545 GCCTTCTTGCCGGACTGGCAACCAACTTCTATTCTCAAAGCATTTTCCTG 594
BSNT_05630___ 532 GGTCTTGTCGGTACAATCGGTGCCATTCTGCCGATGCTGGCATGGCAAGC 581
||.||.||.||.||.||.||.||..||.||||||||.|.|.||||||.||
BL03994___atp 595 GGGCTGGTTGGAACCATTGGAGCGGTTGTGCCGATGATCGTATGGCAGGC 644
BSNT_05630___ 582 ATTCAGTTTATTTATTGGTGCCATCCAGGCATTTATTTTTACAATGCTGA 631
.|||||.||.||..|.|||.|.|||||||||||.||.||.||.|||.|.|
BL03994___atp 645 GTTCAGCTTGTTCGTAGGTACAATCCAGGCATTCATCTTCACGATGTTAA 694
BSNT_05630___ 632 CGATGGTGTACATGTCTCATAAAATCAGTCATGATCATTAA 672
|.|||||.|||||||||||.|||.|.||||||||.||.|||
BL03994___atp 695 CAATGGTTTACATGTCTCACAAAGTAAGTCATGAACACTAA 735
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